2024-09-28 11:20:46, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS NM_074903 550 bp mRNA linear INV 11-JUN-2024 DEFINITION Caenorhabditis elegans DNA damage-regulated autophagy modulator protein 2 (clc-12), partial mRNA. ACCESSION NM_074903 VERSION NM_074903.2 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 550) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 550) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (11-JUN-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 550) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (23-MAY-2024) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 550) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On Sep 4, 2019 this sequence version replaced NM_074903.1. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..550 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene <1..550 /gene="clc-12" /locus_tag="CELE_F49H6.13" /db_xref="GeneID:186080" CDS 1..513 /gene="clc-12" /locus_tag="CELE_F49H6.13" /standard_name="F49H6.13" /note="Partially confirmed by transcript evidence" /codon_start=1 /product="DNA damage-regulated autophagy modulator protein 2" /protein_id="NP_507304.1" /db_xref="GeneID:186080" /translation="
MATIKRLLFTVVVICAIVCNFFAVFSIAWVTDWSGSIGLFPLWDITIGWYIAASSLMYVSFLCSVLVFIQLIITSNNVRKNGYSHLQRGKFISIAVFSLLITVSTAVAVILIAVNLPHMNKKYYDNATLGYSAWFSVAGAVFYLVVAGFSISYARVECSFTKSQEPCSII"
misc_feature 7..477 /gene="clc-12" /locus_tag="CELE_F49H6.13" /note="Tight junction protein, Claudin-like; Region: Claudin_3; pfam06653" /db_xref="CDD:399563" ORIGIN
atggcgactatcaagcgtttattatttactgttgtagttatttgcgcaattgtctgtaacttttttgcggttttctcaatcgcttgggtaacagattggagcggaagcattggactttttcccctttgggatatcacaatcggatggtatatagctgcaagctcactgatgtatgtatcatttctttgtagtgttctagtatttattcagttgattatcacttccaataacgttagaaagaacggatattctcacttgcaaagaggaaaattcatttcaattgcagttttctcactgctcatcacagtttcaacagctgttgccgttattctgatcgctgtcaatttgccacatatgaacaaaaaatattacgacaatgctaccctgggatactctgcatggttcagtgtagctggtgcagtgttctacctcgttgtcgctggcttctcaatcagttacgcacgtgtagagtgtagttttactaaatcgcaagaaccatgttctatcatctaatgttttttttaatttcaaatttcaaacttgaataaaa
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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