LOCUS       NM_001125942             549 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana root meristem growth factor (RGF5), mRNA.
ACCESSION   NM_001125942
VERSION     NM_001125942.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (bases 1 to 549)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 549)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 549)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003076).
            
            On Sep 12, 2016 this sequence version replaced NM_001125942.1.
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     gene            1..549
                     /gene="RGF5"
                     /locus_tag="AT5G51451"
                     /gene_synonym="CLE-like7; CLEL7; GLV10; GOLVEN 10; root
                     meristem growth factor 5"
                     /note="Encodes a root meristem growth factor (RGF).
                     Belongs to a family of functionally redundant homologous
                     peptides that are secreted, tyrosine-sulfated, and
                     expressed mainly in the stem cell area and the innermost
                     layer of central columella cells. RGFs are required for
                     maintenance of the root stem cell niche and transit
                     amplifying cell proliferation. Members of this family
                     include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025
                     (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515
                     (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770
                     (RGF9)."
                     /db_xref="Araport:AT5G51451"
                     /db_xref="GeneID:6241076"
                     /db_xref="TAIR:AT5G51451"
     CDS             262..528
                     /gene="RGF5"
                     /locus_tag="AT5G51451"
                     /gene_synonym="CLE-like7; CLEL7; GLV10; GOLVEN 10; root
                     meristem growth factor 5"
                     /inference="Similar to RNA sequence,
                     EST:INSD:CB254353.1,INSD:CB254977.1"
                     /note="root meristem growth factor 5 (RGF5); FUNCTIONS IN:
                     molecular_function unknown; INVOLVED IN:
                     biological_process unknown; LOCATED IN: endomembrane
                     system; Has 30201 Blast hits to 17322 proteins in 780
                     species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
                     Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
                     - 2996 (source: NCBI BLink)."
                     /codon_start=1
                     /product="root meristem growth factor"
                     /protein_id="NP_001119414.1"
                     /db_xref="GeneID:6241076"
                     /db_xref="TAIR:AT5G51451"
                     /db_xref="Araport:AT5G51451"
                     /translation="

MSSIHVASMILLLFLFLHHSDSRHLDNVHITASRFSLVKDQNVVSSSTSKEPVKVSRFVPGPLKHHHRRPPLLFADYPKPSTRPPRHN"

ORIGIN      

cgaggtttatatgtccttttccttttgttgtttctttctctctttttgactcatgtttggcttttcccatgagcttttccagcacattcatctggattgattaaataaaaaacttgtttattctgtgatttaattcttacattcaaatacttatgcgtgaacttgctcttattatatagtctcctactacctattaagtcttttaacggttcataatcctcttagtcgttgagccttgtatgactgcttctgttgtgaccaatgagctcaatccatgttgcttcaatgatccttctcttgtttctcttcttgcatcattctgattctcgtcacctcgacaatgtccacattacagcgtctcggttttcactcgtcaaggatcaaaatgttgtctctagttcgacatctaaagaacccgttaaagtttctcggtttgtgccgggtccattgaagcaccaccatcgtcgtccaccgctcttatttgcagattatccgaagccgtccactcggcctccacgccataactgaaacctctctctttagtttttt

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