2025-04-03 19:41:12, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XR_878709 645 bp RNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus predicted gene, 42009 (Gm42009), transcript variant X2, ncRNA. ACCESSION XR_878709 VERSION XR_878709.4 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000071.7) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 21, 2020 this sequence version replaced XR_878709.3. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000001635.27-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/01/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..645 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="5" gene 1..645 /gene="Gm42009" /note="predicted gene, 42009; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns" /db_xref="GeneID:105246770" /db_xref="MGI:MGI:5624894" ncRNA 1..645 /ncRNA_class="lncRNA" /gene="Gm42009" /product="predicted gene, 42009, transcript variant X2" /db_xref="GeneID:105246770" /db_xref="MGI:MGI:5624894" ORIGIN
ctcaggcactctctcctcctcctcctgctccgctccgcccccgccctccctctgcctccagcagcgtccactccatccacccgtgccccgcagggcactaaagccagactattaataaccctccgcctggctgagggctcaggtcacactctggaaataccatcttcagtgcatgttctgtcttgcctcctactctagggactcgcagaagagagacagcccctcattggatcaagaagtacaaggaatccccacttacagtatggcccaagtcttacagcctcagacttctgagaacgaaattttaaaaaacggcagtttaagttatgaaaagagggacgttgtcagtcagagtctattgggataggcctctttgcacatcttcattgagaatttctagaggcccttctgcctggaaccaagaagggagaaagcttgacagcactgaattgagcatcttttgtggcctgtgcttctccccacccagcaccccctcccccttgcccttgtctctcatgtagcacaggcaaaccttgagctccttatacaacagacggtgaccttgaactcccacttgcccttgtctctcatgtagcacaggcaaaccttgagctccttatacaacagacggtgaccttgaactcc
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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