2024-04-25 07:19:10, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_746435 3803 bp RNA linear PRI 12-FEB-2021 DEFINITION PREDICTED: Saimiri boliviensis boliviensis NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, misc_RNA. ACCESSION XR_746435 VERSION XR_746435.2 DBLINK BioProject: PRJNA699579 KEYWORDS RefSeq. SOURCE Saimiri boliviensis boliviensis (Bolivian squirrel monkey) ORGANISM Saimiri boliviensis boliviensis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024100921.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Feb 12, 2021 this sequence version replaced XR_746435.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Saimiri boliviensis Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3803 /organism="Saimiri boliviensis boliviensis" /mol_type="transcribed RNA" /isolate="100643" /sub_species="boliviensis" /db_xref="taxon:39432" /chromosome="Unknown" /sex="female" /tissue_type="blood" /dev_stage="adult" /collection_date="2019-07-23" /breed="Bolivian squirrel monkey" gene 1..3803 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 96 ESTs, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns" /db_xref="GeneID:101050171" misc_RNA 1..3803 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X2" /db_xref="GeneID:101050171" ORIGIN
gctttgccctgccccctgccccgccttgtccccgtgccatgacgcccctcccctctgggccccgcccctcccgcttccgggtcaggccctagaaagcgccgggaaaaccacatttcccagagtgcaccgccacggcggggtcctcggaccggcgcttgctcgcctgcgccatttctgtagagaggaacggcggtgcggcctgtggtcatggcgctgttcccggcctttgcgggggttagtgagacccccgatagtgggagctccaggaaagagttagactggctgagcaacccaagcttttgtgtcggatccataacgtcccggagccaacaaactgaagcagccacagcccatgtttctgaagggtcaccactgtcaaggagtcctctgaaatcagagccttcagatgaaagtgacactaacaaaaagttcaaacaaacaagcagaaaaaagaagaaagagaaaaagaaaagaaggaagcaccagcatcataagaaaacaaagaggaaacatggacagtcgagtagcagcaggtctgagacagacactgattctgaaaaggacaaaccttccagaaccatcggaggcagtaaaaaggaatctgagaaaccgaatcaaggaaataatgctgcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgacaggagaaaccttcagaacagataagaaaccagatcctgcaaactgggagtacaagtctctctaccgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaatcctgcgaagcaacgcatatcttgggaagggacttccacagagaagaagcattcacacaagcaggttgaacgctattttactaagaagagtgtggggttaatgaacatcgatggagttgccattagcagtaaaactgaacctccatcatctgaccccgcctcctttataccagtgaaggacttggaagatgcagctcctgttacaacctggttgaatcctctggggatttatgatcagtcaactacacagtggttacaaggacagggtcctccagagcaggaatccaagcagccagacacacagccagacagcgagagtgcggctctcaaggccagggtggaggagttcaacaggagggtgcgggagaatccgcgggatacgcagctgtggatggcatttgttgcttttcaggacgaggtcatgaaaagtcctggcctgtatgccatcgaggaaggagagcaggaaaagcgaaagaggtccctgaagctcattctggagaagaagctggccattctggagcgggccattgagagcaaccagagcagtgtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttacatcccaataatacggtcctttggcagaaataccttttgttttgccagagccagtttagtaccttttcaatatcaaaaattcacagtctttatggaaaatgcttgagcaccttgtctgctgtgaaggatggcagcatcttatctcaccctgcgttgcctggcacagaagaggccatgtttgccctctttcttcagcactgccactttctgcggcaggccggccactctgagaaggccatctcattgttccaggccatggtggacttcacattcttcaaacccgacagcctgaaagatatgcctaccaaaggacaggtagaattctttgagcccttttgggacagtggagagccccgggctggggagaagggagcccgaggctggaaggcgtggatgcaccagcaggagcgaggtggctgggtggtcatcaacccagacgaggatgacgatgaaccagaagaggacgatcaggaaataaaagataagactcttcccaggtggcagatctggcttgctgctgagcgttcccgagaccagaggcactggcggccctggcgccctgataagaccaagaagcaaaccgaggaagactgtgaggatcctgagagacaggtgttgtttgatgatattgggcagtctttgatcagactttcaagccaagatctgcagttccagctggtggaggcctttctgcagttcttgggtgtgccttctggcttcactcttccagcctcctgtctctatctggccatggatgagaacagcatctttgacaatggactttatgatgaaaagcccttgacttttttcaaccctttgttttccggggccagcagtgtgggccgcatggaccggctgggctgtcctcgctggaccaggggtcagaaccgagagggtgaggagttcatccgcaacgtcttccacctggtcatgcctttgttttcaggcaaagagaagtctcagctctgcttctcctggttacagtatgagattggaaaggtcatgtggtgtctgcacactaaaaacaagaagagattaaagtcacaagggaagaactgcaaaaaactcgccaagaatctccttaaggagccagaaaaccgcaacagcttttgcctctggaagcagtatgcccatctggagtggttgcttggcaacacagaggatgctaggaaagtttttgacacagcactcggcacggcaggaagccaaggactgaaggactctgaactctgtgagctcagtctgctctatgccgagctggaggtggagctgttgccggaagtgagaggggccgcctccgctcgagctgttcacatattaaccaagctgaccgagagcagcccctacgggccctatactggagaggtgttggctgttcacattttgaaagcacgaaaggcttacgagcacgcgctgcaggactgtttgggtgacagctgtgtctccgatccagctcccaccgattcctgtacccgcctaattagcttggccaaatgcttcatgctcttccagtatttgaccatcgggattggtgctgctgtacggatatacgaacaggtatttgccaaactgcacggttctgttttcccagaaggctctggcgaggggaacagtgccagctcccagagttggagcagtgttctcgaagccatcacactgatgcatgcaagcctgctgagattccacatgaaagtgagtgtttacccgctggcccctctgcgagaggcactctcacaggctttaaagctgtatccaggcaaccaggttctttggaggtcctatgtccagattcagaataagtcccacagcgccagcaagaccaggagattttttgacacaatcaccaggtctgctaaactcttggaaccttggctgtttgcaattgaagctgagaaaatgaggaaaagactagtggaaactgttcagaggttagacggtcgagagatccacgccacgattcctgagaccggcttaacacatcggatccaagccctgtttgaaaacgccatgcgcagcgacggtggcagccagtgccccttgctgtggaggatgtatttgaactttttggtttccttaggaaataaagaaagaagcaaaggtgtattctacaaagcacttcagaattgtccttgggcaaaggtgttgtacctggacgctgtggagtacttccccgaggagatgcaggaggtcctggatctgatgaccgagaaggagctccgggtgcgcctgccactggaggagctggagctgctgctggaggattagagagccgcggggaacggaccgtaactgtgaggccaagtcgcccaccctgcagagccaggaggcacgaggggagaatgtaccgagtctgctgtgtcacccag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]