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Previous release (v1)
2026-06-22 14:27:41, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_012202535 4918 bp RNA linear PLN 28-APR-2025
DEFINITION PREDICTED: Aegilops tauschii subsp. strangulata uncharacterized
lncRNA (LOC120973294), ncRNA.
ACCESSION XR_012202535
VERSION XR_012202535.1
DBLINK BioProject: PRJNA702515
KEYWORDS RefSeq.
SOURCE Aegilops tauschii subsp. strangulata
ORGANISM Aegilops tauschii subsp. strangulata
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_053036) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_002575655.3-RS_2025_04
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 04/18/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..4918
/organism="Aegilops tauschii subsp. strangulata"
/mol_type="transcribed RNA"
/cultivar="AL8/78"
/sub_species="strangulata"
/db_xref="taxon:200361"
/chromosome="2"
/tissue_type="seedling"
/geo_loc_name="USA: California"
gene 1..4918
/gene="LOC120973294"
/note="uncharacterized LOC120973294; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 1 long
SRA read"
/db_xref="GeneID:120973294"
ncRNA 1..4918
/ncRNA_class="lncRNA"
/gene="LOC120973294"
/product="uncharacterized lncRNA"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
/db_xref="GeneID:120973294"
ORIGIN
ttccattccatctcctgcataaggattagctagcagtttgataagcacatttcatatacataattttggtactcaatatagcatctattgtgatatattcgtccactcttgccatgattgattgaatgttgcttgataatcataaaaaaggatcatttactagtctttggtctatcttgcagaaatgtgcgcaaaggcactaataatcgtcaagatttcgtctatgaggctatcgagaagagtgaagaagagaagagaaggaagaagagacttgtgagatgaaaagaagtaaccagggggctagctgaagaagagaagggatcatcttgtgctaaaagtatagaaggagaagggccaaatcagaaaagtggcagatcagagaggggaacaaaatccctagccgcatcattcgatcccttcgggcctggcacatctcactctccctcacccctccttctccacctccggccgccgccacggccaggccgacgtggcggtgcgtcacccagccatctatccactccatctccaccacgccatctccaccacccgccgctgccagcaccgcatcaccaccaccatccgctgcatcttcctttgccgcgccacacgaccagcgactctctctcaacgcaccttgctgccgctcttcttccctcgcctcaaactgctgctgctctcttctccccggcacctccacactgctgctacaactcctttcctttgctgttgtcccatctctccttgcggtcctgcagcttcttcttcccaaaccttgctgctgccgctctcttctccccaaaactgctgcttcttcttctcccctgcgcccccttgctgaacctatgctctgaacctcctccttctgctgctccttttgtgtgtgtgtgtgtaattcatgaaaaacatattgttgtgttaagtgaacaattagtgttgagacttgttcaattgcaaactgttttgtgctagatttatatgtgactgtcagttcgtgggttgtataaattcagattactacctgtgattttattttgtagtgagaccgctctttgtgaagtcagaggtgtgattgtttttaatctcaagttcaatgtgctagctatgtaccagtgacatatgtgacatgtatatgtgatgtgaaataattgtattctgtccctaatcttgttccttccgtgtgtcttatacttgctagttttatatacatatatgtgttcttgtcttgttagttccctttgttgaagttgtcctcctgtagtttctatttctcaagtgctaggaaagcaccaaaaagatattgagtcaaatctgaatctacccttggtgtttgcattttctttgtcgacgatctttgggaacgaccttgttagtttaggttttattttttttgcattcgtctcttaaaattgtgttacctagatttagctgagcatagtcatcgtcgcctagtccctgtggggaacacgacactcgcagttcgggcgaaatatcccactgtaccttcaattgatcattttggcaccgttgccggggactagcgtcgaacgattgtgtgaagctataggctaggcttagtatagtttttgtttaaatttccattcaaatttatttctgtgcttcttttacctttttactttttgttgcttcggcttattaggatactaactttctgactagtgtttactatttatgagtgtttgtaggaaatctgaactaattgcaggttgttctatagttacactcggttaagatggcattgcttcgtgatctttggatgcccaaaagtcggtgctatatcacaggaccgatttggccaactattgaggcagagaacttcgagttgaaacctagtcttattgctttggttcaacaacaacagtttggaggactgcctactgaggatccctatgagcacttacaccgagtcatggagtattcagatatagtcaagtaccatggagttcctcaagatgcaatcatgtgcaggttgttcacattctctctccgtgatgatgctcgtgcttggtatcgatccttgccatcaaggtcatacagttggaatgagatatcatgagctttcttggatagatatttcccactacacaagcagtctgcgattcgagatgagatcttcaattttgttcagcgtgaatacgagagcttgtatgatgcttgggagagatgcaaggctttatcaggagatgtcctaaccacgggcttgagagatggttagagttacatatattctatagaggattgacttcggacactcgatcttacgtcgatatggcagcgggtggagctattacaaacaagacacttgatgatgcttttctgctgattgagagtatagccttccaccaacttcagtggtacaatgagaagcccatctctgattcagttccttgtttgcaacaaatcacttcatctcagcaagaatctcttacacaaaagtcggaaccagtttctccatgtaacaagattgagctttcatggattatctttgatgatgatgacaccatcctagttgacacacacactttagatcatatggatactagtgttggagattttgttttcattgtgatgattcttccatggatgagccagagctgcagttagttgttttttatattgaggagtcacctttggttgatattgatcatgtgctgctagagccagatatggagaagttcaatttcaatgatgttagacgcattgattcctcaacacttgagcctaagatggagagcttcatggttaattatgatgaggtggattgagatgtcaaggagccaagctctactatttcacttgttgacatgagtccggtggaaatttctactaccacacctcacttggtatcttcaattgaggtagtcctgaagtttcttcccaagtatctcaggtatgatatcagctttctcgacaagatatatatgccatatcatggatactgcctatgcaccatgcgatttattgatgatatctatttatcatatgttcaatagatatgcttatttgataggatactctattgatgacttagagggcattgtccctatcatttgtattggcttggttgttgagtgttctttcaggtttactcttgtgcaccattcattgcgggctgaccaagttcgagatgacatcccatgggatcctggtggattcacggcatggtgataaggagaagcaatgtgcacacatgaggaagagcgaagatggagcatgtatgaggaagcaaaaggagaggagctgcagttggtgaggtgatcgagcgagtgctacatcatcaaagcctggtgtataccatgttctctggatcggtggtatgttcgtttggggagacaaacaaaaataataataattggtcgagccaggtgtataccatattctcgggatcggtggtatgttcctttggtgagaccggtaaaatattatcattgttgctaccttcaaattcaataagtgatttgatcacaggaattacttctagttctttttgttctcgggatcatgctctctttaggaaccatttggcacagtcatcatttaaacttgttgatcctcttttatcattgtaaaagtttaaaatggtcatgcttactagtatccgactgctttgtagcactcttaaccatcaattttcactagctaagtccaaagcatgcattgtttggagatgtattttaccaggacattctttactcagctcactgttcacattcttgctcttgtcatatgcctttgcttgaggacaagaaaagatttaagtatgggggaacttgataagcacatttcatatacataattttggtactcaatatagcatctattgtgatatattcgtccactcttgccatgattgagtgaatgttgcttgataatcataaaaaggatcatttactagtctttggtctatcttgcagaaatgtgcgcaaaggcactaataatcatcaagatttcgtctatgaggctatcgagaagagtgaagaagagaagagaagaaagaagagacttgtgagatgaaaagaagtaaccagggggctagctgaagaagagaagggatcatcttttgctaaaagtatagaaggagaagggccaaatcagaaaagtggtagatcagagaggggaacaaaatccctagccacatcattcgatcccttctggcctggcacatctcactctccctcacccctccttctccacctccagccgctgccacggccaggccggcgtggcggtgcgtcacccagccatctatccactccatctccaccacgacatctccaccacccaccgctgccagcaccgcatcaccaccaccatccgctgcatcttccttagccacgccacaccaccagcgactctctctcaacgcaccttgctgctactcttcttcacttgcctcaaactgctgctgctctcttctccccggcgcctccacactgctgctactactcctttcctttgctggtgtcccatctctccttgcactcctgctgcttcttcttcccaaaccttgatgctgccgctctcttctccccaaaactactgctgcttgttctctcctgcgcccccttgcagaacctctgctctaaacctcctccttctgctcctccttgtgtgtgtgtgtgtgtaattcataaaaaacatattgttgtgttcagtgaacaattagtgttgagacttgttcaattgcaaactgttttgtgctagatttatatgtgactatcagttcgtgggttgtataaattcagattactacctgtgattttattttgtagtgagactgctctttgtgaagtcagaggtgtgattgtttttaatctcaagttcaatgtgctagctatgtaccagtgacatatgtgacatgtatatgtgatgtgaaataattgtattctgtccctaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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