ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2025-12-08 04:08:18, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XR_011989710 961 bp RNA linear VRT 01-APR-2025
DEFINITION PREDICTED: Paramormyrops kingsleyae uncharacterized lncRNA
(LOC140588356), ncRNA.
ACCESSION XR_011989710
VERSION XR_011989710.1
DBLINK BioProject: PRJNA1241853
KEYWORDS RefSeq.
SOURCE Paramormyrops kingsleyae
ORGANISM Paramormyrops kingsleyae
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala;
Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_132799) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_048594095.1-RS_2025_03
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 03/27/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..961
/organism="Paramormyrops kingsleyae"
/mol_type="transcribed RNA"
/isolate="MSU_618"
/specimen_voucher="MSUM:7721"
/db_xref="taxon:1676925"
/chromosome="3"
/sex="male"
/tissue_type="brain"
/dev_stage="adult"
/geo_loc_name="Gabon: Bambomo Creek"
/collection_date="2023-06-22"
gene 1..961
/gene="LOC140588356"
/note="uncharacterized LOC140588356; Derived by automated
computational analysis using gene prediction method:
Gnomon."
/db_xref="GeneID:140588356"
ncRNA 1..961
/ncRNA_class="lncRNA"
/gene="LOC140588356"
/product="uncharacterized lncRNA"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
/db_xref="GeneID:140588356"
ORIGIN
ttttattgcttttatataacgcggcttcagatggcacgtggccactgggccacgtcacgatcgttctagaactcctggacagccgtgatatttttttaaatctctagtacgcttcaacagagactccggtctacataaagcgcacctgtgaagaattattcagtctgatccgaagacagcgttgagtacagtccaacttatatgattcataatggaagtgaaaactctgagtgatttcttggaggaaaggcgagaggagaaactgagagagatggtggatttcatactggatgaattggaagacttagaaaattctggttctgagctggaagtggaaatccagcggtttttgaataagtgcacacaagaagagattgtggccatgagagagaaagagaagaaagacaaggcaaaaaatgagaacatgagtggaaggagagaggaggagaagaggtgtgaattaggagaacagatggagatggagagtgaggtctactcatacaagaggaagggatcaatgaaaatcccactgatagttgaccttgaggaggaaaaaatgaggaggaaggggatcggcttttttaagaagacactgaggttactgaagaagtgtcagtcagtaaaggtgcaaaagaccgagaagagaaggactgacattttaggatggccgataacaatgtttcagcgctggagcaacaaaaggagagggtacggtcagctcaagacagagacgccagagctctcagatgtactgccaagagggaagtctaaactatggacagagcgctccaccctggaggccatataaacatggtgtccgtggattgtgacccaccccacctcctcaaagcgacggcctctctcctgggcccttaaatattttttgttttgttttttacttgtataattgtatatagaaatatgaacatataaataataaataataaactgtaaataataa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]