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2024-04-28 07:24:02, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_009399173            5320 bp    RNA     linear   MAM 09-SEP-2023
DEFINITION  PREDICTED: Mustela nigripes NRDE-2, necessary for RNA interference,
            domain containing (NRDE2), transcript variant X2, misc_RNA.
ACCESSION   XR_009399173
VERSION     XR_009399173.1
DBLINK      BioProject: PRJNA1010132
KEYWORDS    RefSeq.
SOURCE      Mustela nigripes (black-footed ferret)
  ORGANISM  Mustela nigripes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia;
            Musteloidea; Mustelidae; Mustelinae; Mustela.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081569) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_022355385.1-RS_2023_09
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 09/07/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5320
                     /organism="Mustela nigripes"
                     /mol_type="transcribed RNA"
                     /isolate="SB6536"
                     /db_xref="taxon:77151"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="spleen"
                     /dev_stage="adult"
     gene            1..5320
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:132000100"
     misc_RNA        1..5320
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X2"
                     /db_xref="GeneID:132000100"
ORIGIN      
cacaaaaaccacacttcccagagtgcaccgcgggcgcgaaggcctcactgtcggcgagcgctctccggcgccatttctgtagaggggaacggcagtgcggcctgtaatcatggcgctgttcccggcttttgcgggcattggtgaggctcccaatagcggcagcgccaggaaagaattagattggctgagcaacccgagcttttgtgctggagccgtaacctctctgagccaacagcctgaggaggccaccaccctggtttctgaagggtcatcgccgacgaggagtcctctgaaatcagagacttcagatgaaagtgacgctaacagaaagcccagacaaacaagcaggaaaaagaagaaagagaagaagaagaagaggaagcatcaccacaagaaaaccaagagaaaacgtgggcaggctagtagcagtggctctgagccggatagtgagcctgaaaaggacaaaacttccagaagcactggagacagtagaagggaatccgagaagccaaggcaagaaagtcatgctgctgctgatgttgggcatcgctttgtttggcttgaggacgtgcaggctctgacaggagaaaccttcagaacagacaagaaaccggatccggccaactgggagtataagtctctctaccgaggagacatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcctgggagggggcttccacagaaaagaagcattcgcacaagcatgttgagcgctattttacgaagaagagcgtgggattgatgaacattgacggagttgccgtcggcagcaaaaccgaacctccgtcatctgagccgctctcctttatccccgtgaagggcccagatgatgcgcttcctcctgttacaacctggttgaaccctctgggcatttacgatcagtccaccacgcagtggttacaaggacagggtccttcagagcaagaatcaaagcagccagactcagagatggatagagagagcgcgctgctcaaggccaaggtggaggagttcaaccggagagtgcgcgagagtcctcgcgacgtgcagctgtggatggcctttgttgcttttcaggatgaggtcatgaaaagccctggcctgtacgccctcgaggagggagagccggagaagcggaagaggtctcggaagctggtgctggaccggaagctggccatcctggagcgggccatcgagagcaaccagagctccgtggagctgcagctggccaagctggagctgtgtgctgagttctgggagccctctgcgctgctcagggagtggcagaagctgatattcgtgcaccccaacaagacggccctgtggcagaagtaccttttattttgccaaagccagttcagcaccttcactgtcgccaagatccacggtctctatggcaagtgcttgagcacgctgtccgcggtgctggacggcagcatcctgtcacaccccgcgctgccgggcaccgaggaggcggtgttcgctctctttcttcagcactgccacttcctgcggcaggctggccactcggagaaggccgtcgctctgttccaggccatggtggacttcaccttcttcaaacctgacagcgtgaaagacctgcctaccaaaggacaggtggagttctttgagcccttctgggacagcggggagccccgggctggggagaagggcgcccgcggctggagagcgtggatgcagcagcaggagcgaggtggctgggtggtcatcagtccagatgatgacgatgatgagccagaagacgaggaccaggaaatccgagataagagtctgcccaggtggcaaatctggcttgccgctgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaggaagcaaaccgaggaagactgtgaggaccccgagagacaggtgctgttcgatgacatcgcacagtctctgatccagctctccagaccggatcttcagttccagctggtcaaagcctttctgcagttcctgggtgtgccttgtggcttcagcaccccggcctcctgcgtctacctggccatggatgagaacagcatcttcgataacgggcttcatgatgaaaagccattgactttcctcaacctctccttcaatggcatcagctgtgttggccgctcagaccccctggactgccgtcgctggacccgaggtcacagtcgagagggcgaggagttcatccgcaatgtctttcaccttgtgatgcctctgttttcaggccaggagaggtcccagctctgcttctcctggctacggtgtttttctaggatggactcttctgccctctgctggccactggtcatttggtgtctgcacactaaaaacaagaagaggttaaagtcccaaggaaagaactgcaaaaaactcgccaaaaatctccttaaggagccagaaaaccgcaacgatttctgcctctggaagcagtatgcacatctggagtggctgctcggcaacacggaggacgccaggaaggtgtttgacacggcgctcagcctggcgggcggcggggaaccgagggggtccgagctctgggagctcggcctcctctacgcgcagctggagctggagctggagctctcggccgatgtgagggggaccaccgcggcccgggccgtgcacgtactgaccagactgacggagaatgggccctatgggccctactcggggccggtctcggccgttcatgtcctgaaagcccggaaggcttacgagcacgcgctgcaggactgcctggggcagagctgtggctccgcttcagctcctgcccgcctcgcgagcctggccaagtgcttcctgctcttccagtatgtgactgtaggcatcgaggcggccgtgcggctctacgagcaggtgtgtgcggggctgcggggctcggtgtgcccgggcggcgtactcgaggctgtcacgctgctgcacacgggcttgctccggttccacaccagggtccacgtttaccccctggctcccctgcgccaggcgctctcagaggcgatacagctgtacccagacaaccagcttctctggagggcctacatacaggttcaaagcaagtcccacgcagccagtaagaccagaaggttcttcgatgctgttaccaggtccgccaaagccttggagccttggttgttcgcgattgaagctgagaaaatgaggaagaggctggtggagaccgttcagagggtggatggcagagagatccatgccacgattcccgagaccggcttggctcatcggatcagagccctgtttgaaagcacgttgcagagtgaccatggccgcctgtgccctttgctgtggagaatgtatttgaactttttggtttccttgggaaacaaagaaaggagcaaaggcgtgttctacaaagctcttcagaattgtccttgggcaaaggcgctgtacctggatgccgtggagcacttccccgaagagatgcaggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccctggaggagctggcgcttctgctggaggactagagaccgggagggaatgggccctgccttccaggcctcgtcgcctgccctgccggagctgggatgcacgagattggggatgcctgggtcaaaaacaacagctgtggcagccaccctgtgaactttagggctggaagactacttggcccctttgatggtgaggacatgggcacagggccaagccgtggtgtcaggacactggcagctagaggctgagccagtgaaggaccaggcttaggcctgcagaggggcagggggaggctgctggcaagtgacacaggcttagttcaagtgggaagggggacaaggcactaagcttgagaataagacgtggtgacgatatctttttggccagacaggcggaggggcaggtgtgagggcttagaagcatggacttctccctgagtaccagtgaaggatggtggatggaagacaaaaaggagcgcctaagcagatggcctctgaccctccagagacagcctcagccagctgctgggtcccttcggtggccagcgggataaccaagccaggctcttcccctcctgacggcctgccaccctgtgctccagcccagcccttcacgtcggcccctggcagtgcaagtgcactgaaggtggcccacagttgcaggtcaggcggcctgccttccagctccagccccactacttgctcaactcccagggctcccacggccccaggctagtcaccggcctgagtttcctgcactgtaagatgatgagctgcaacagctccgcccctctgagctcagttgtctcctggtgcctccactgtgggcagcccccagtgaccccttcaaagaactgtgcttcctctgcaacttccacggcactgaactgctaattcccggactgtaaaacttactcaggccagctagttgcataatgaaccaaatacatatctgtatacgcatctattcatccaatattctattcactcagtacagtggaccagacagtgaacccaatctgaactgcacagaacagcttttaaatctgtggtttcccaccatggctctgatacatggacctggccacactccagatgaacaggtcagaattttcagggatgggaccatcactattttttaaagctccagggtgattccaacgtacagccaagcttaagcatcccagtttattttgttttataaactctttttttaaaaaagattttatttatttgacagaaatcacaagtaggcagagaggcaggcagagagagagggggaagcaggctccccgctgagcagagagcctgatgtagggcttgatcccaggaccctgagatcatgacctgagccgaagacagaggctttaacccactgagccacccaggcgctccttataaactttaatagattcacattactcttatgaatactttaaagttttatgttttatagcacataaatctaatatatttgagtgcagagaggagttctatgaaactgtaaatgcattcacactgagcaggcatttttggagggggagggtttccctaccgtgcttatttttgttgcaattcctactgttgtttttaatacattaaatctgttaagtctacaattttaaaactaaagtaattcagttttttagcatcacctatacagataaaaatacttttatgtaatatgtatatttccatatttactcagaaaatgcacaaaatgtttagaaaaccttgtttcaaactaaggagttgtggcatccttactcaaga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]