2024-03-29 11:18:37, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_005791131 9088 bp RNA linear MAM 01-APR-2021 DEFINITION PREDICTED: Puma yagouaroundi NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, misc_RNA. ACCESSION XR_005791131 VERSION XR_005791131.1 DBLINK BioProject: PRJNA717316 KEYWORDS RefSeq. SOURCE Puma yagouaroundi (jaguarundi) ORGANISM Puma yagouaroundi Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Puma. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024412396.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Puma yagouaroundi Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..9088 /organism="Puma yagouaroundi" /mol_type="transcribed RNA" /isolation_source="originally collected by Mitchell Bush (The Center for Species Survival, Department of Reproductive Sciences, Smithsonian Conservation Biology Institute, Smithsonian's National Zoological Park, 1500 Remount Road, Front Royal, VA 22630, USA) from Blijdorp Zoo, Rotterdam, Netherlands (Director Dirk Van Dam) from a breeding male juguarundi from Mexico" /db_xref="taxon:1608482" /chromosome="Unknown" /sex="male" /cell_line="HYA-1" /tissue_type="fibroblast cell line, passage 10" /ecotype="Mexico" /collection_date="Dec-1981" gene 1..9088 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns" /db_xref="GeneID:121032179" misc_RNA 1..9088 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X2" /db_xref="GeneID:121032179" ORIGIN
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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