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2024-03-29 16:10:19, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XR_005557115            3468 bp    RNA     linear   VRT 05-FEB-2021
DEFINITION  PREDICTED: Crotalus tigris NRDE-2, necessary for RNA interference,
            domain containing (NRDE2), transcript variant X2, misc_RNA.
ACCESSION   XR_005557115
VERSION     XR_005557115.1
DBLINK      BioProject: PRJNA699292
KEYWORDS    RefSeq.
SOURCE      Crotalus tigris (Tiger rattlesnake)
  ORGANISM  Crotalus tigris
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata;
            Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae;
            Crotalus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024096790.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Crotalus tigris Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3468
                     /organism="Crotalus tigris"
                     /mol_type="transcribed RNA"
                     /isolate="CLP2741"
                     /isolation_source="sand"
                     /db_xref="taxon:88082"
                     /chromosome="Unknown"
                     /ecotype="Arizona"
                     /country="USA: Arizona"
                     /lat_lon="31.38980 N 111.09225 W"
                     /collection_date="2018-08-08"
     gene            1..3468
                     /gene="NRDE2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 2 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:120309566"
     misc_RNA        1..3468
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X2"
                     /db_xref="GeneID:120309566"
ORIGIN      
ttgcccaattgctggaggcggcaacggaagtcatcgttctggaggttttctcggcccgccgtgatggctctttttcctgcttttgccgatgctgataatgccggagatgtacaagcaagcgaaggctcgaaaagagatttgaactggctgacaaatcaaagcttctgcaatgaagatgcactgagattgcaccaaaatgttttagaaattacagactgtgttcctctgctccaaagcaatacagccaccagttttgaactcccagaagaaaatgaagccaacaaaagtttccaagattcacctaaaaaaagaaagaaaaagaaaaaacaaagagaccataagaaaaataaaaagaaaagaagaaaagaatggaccactagtgggtctgaacctgaggatgtgagagatgataaaaataatgaaaaaggaggaacagaattgaacttagaagaaaaaaacacaaatgtgctgtatccctctacttggcttgatgacgttcagggtttgacagcagaaggattcagaacagataagaagccagaccctgcaaattggcagtataagtcattatatcgaggcaacattgcaaggtataagagaagaagcaacttctgccttggccttcaatctaaggagcaacatattatttgggagagctcagcagcagaaaaaacctcttcctataagcggctggaacgctacttcacaaaagctggtcggaagctcctgaacgaggaaggtattcatgtcagcagtaaaaatcaagattcctcatctggctcagcctcctggataccaattttgcagctagacccagcagaggctccttctacaagctgggtagaaggggtttatgatctgcagaccacactgtggctacaaggaaaagggccccctgctgaacatggcttatcaaataagcaagaccctcaagagaaccccaagaatgtagactctcccctaatggcaaaggtggaagaatataactgcagagtcagagagaatcccagggatgtcaaagcatggatggatttggtttcttttcaggatgagctcatgagacatcctagttgttatgccatcagtgagggagaacgggaaatgagaaagaaatcatccaagctaatactggagaagaagctggccattttggaaagagcaatagaaaacaacccaaatgaagtggacctgaaactagcacggctaaaactttgcatagaattctgggagccgtctgctgtggtgaaggaatggcaaaagttgattttcttgcacccaaacaacccagccctgtggcagaaatacctcttattctgccaaagtcagttcagcacctttactgtctccaaaacacatggctgttacggaaaatgcctgagcacattatcagctgtgtatgatggcagtatgctatcccatcccgaactgccaggcacagaggaggccatgctagccatttttcttcaacagtgccatttccttaggcaggctggtcactcagaaaaagctgtgtccctattccaagccctgcttgactttaccttttttaaaccagataatgtcaaggacttgccaacaagaggacagagggaattctttgaacctttttgggacagtggagagcctcgaattggagaaaaaggagctaaaggttggaaggcctggatgcatcaacaagagaagggtggctgggtggtcatcaatccaccagatgaagatgaggaagatgtagaagatgaagaagaaataaaggatagatctctaccaaaatggcaaaactggcttcatattgaacgttcccgggaagcaaggcactggatgccctggcgtccagaaaaaaacaagaaacagtcatcagaagattgtgaagatccagagaggcaggtcttatttgatgaccttggaccatcattgataagactttccagccctgaacttcaatttcaactcctttcctcatttttgcaattcttaggagttccatgtagctgtagactttcgctttcttccttctatatagcaatggatgaaaataacgtatttgacaatggatataacaaccaaggaattctgacttctttggatatgcctctttttggagtcagtaatattggtcatatggactcattggtccaaggagagaagcatgtgacgcactctaaggaaggagaacaatttattcagaatcttttccatatgatgctgcccttattttcaggcaaagacaggtctaacctatgcattttttggcttcagtatgaaatcgctaaggtcaatcagtatttgaaaatgggaaagaaaaagaaactaaaattgcaaggcaagaaaagcaaaaaattagctaaaaatcttcttaaggcacctgacaacagaaataatgtttccctttggcaactatatgcttacctagagtggttacttggcaatatagaagatgctagaaaagtttttgatacatctttggggatggctggaattagtggaatccaaaacccccaattctgtcatcttagccttctttatgctaaactggaagcagaattattagtaaatctagaaggagctgtagaatcacgcgcaactcacatattgaccaaattggctgaaaggggacattatgttccttatcatggacaagtatcatcagtgaatgttttgaaagctcggaaaacatatgagcacctacttcaagattgtttaactgagaacctcacttctgatcaagaacatgctagtgattccagccatctgactggtttggttggctgctacgctcttttccagtatttaactcttgggattgactctgcaatgtcagtatactgtcaggtttctcaaaagctgaaagacgaggatcctggagacaggcttagtggtcaacatttcaccatgcctcttgaagccctctccctcatgcatgtaaacttgctcaggttccacatgaaaatcagtgtgtatcctttgagtcctcttcgtgaagtactgttggaggttttgaagagacatcccagcaaccagtctttttggaaggcatacatccagatccaaagcaagtcgcacaatgctagcaaagcccgacgtttttttgatgctgttacaagaactacacaatcactggagccttggctgtttgcaatccaaatggagcaaatgaggaaaaacctaattgaaagtgtccagagaatttatccattcacctagccctgggatggtcaggtctattggatatgccacacttgaatccagtgccgttgcacccaaggggagatgagcagtatatgagcaagcacaagagaggatggcacatgttggctctagcatatccaattgggagccgactggagatgtgtatgcaatgattcctgaaattgggttaacaaatcgaatcaaagttttatttgaacatgcaattcagactgaaaatggtgctcattgcccattgctctggaggttgtatatatgcttcat
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]