2024-03-28 21:25:15, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_005266146 3578 bp RNA linear VRT 15-DEC-2020 DEFINITION PREDICTED: Anas platyrhynchos NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X3, misc_RNA. ACCESSION XR_005266146 VERSION XR_005266146.1 DBLINK BioProject: PRJNA681492 KEYWORDS RefSeq. SOURCE Anas platyrhynchos (mallard) ORGANISM Anas platyrhynchos Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_051776.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Anas platyrhynchos Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3578 /organism="Anas platyrhynchos" /mol_type="transcribed RNA" /isolate="Z2" /db_xref="taxon:8839" /chromosome="5" /sex="pooled male and female" /tissue_type="multiple" /dev_stage="adult" /breed="Pekin duck" gene 1..3578 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns" /db_xref="GeneID:101792482" misc_RNA 1..3578 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X3" /db_xref="GeneID:101792482" ORIGIN
ggctatggaaaccccatccccggctcttccccgcaggctgaacagtaatcccctccttcagtcccgtcagcagaggcccggaggataacacgacacccccagcccagagactttccccgctcagctcccacagcggcccggccgccattttgggagccggggcaggcgaactacaggtcccagcaggcccggcgccgcgccgccatcttgcccctccgctccgcggggcagcggggcaggcagcggggccatggcgctgttcccggccttcgccggtgccgccgagcccggggagaccccagcgggcagcagcgagggctccaggaaagacctggactggctgagtaacccaagcttctctaccgaagatgcactgttagtgcatcaacgcactacagaagttgcaaattctacccctgaaaaatcaccactaataagcaggactacttcaagatcagagctgtcaggggaaagtgattcagatgagaatctgaaaaagtcaagtaagaaaaggaaaaagaaaaagaaaaagcatcaccactacaagacaaaaaagaaagccaaaggggactccagcagcagcgaatcagacttggacactaagcacatcaaggacagagctacagcaagtggcagaaatcgtgaaaaggaagcagcagcaaatctaggtgataaaacatcaaatcttaccaacaaccgctttgtttggcttgatgacgtccaggctttcacagcagaaactttcagaatagacaagaaatcagatcctgcaaactgggcctacaaatccctgtatcgaggggacattgcaagatataaaaggaaaggagagtcctgtcttggcatagatgcaaagaaacaatgtataacttgggacagtcctgcatcccaaaagaagcaatcacagaggcgacctgagcgctacttttcaaagaacaatgtgaagacattaaacacagatgggattcctgtttgcaataaaagttctccatctgactcagctgcttttataccagttttccaaatggaaagcagtgatccttctgacacaacagaggtaaaccctcttgggatttatgatccatcaactacagtgtggctgcaaggaaaaggaaacaaagatgcagaacatgagcctgtaaatacacagcaggcatttcaggagtctgtgataaatgttaaccccattctgatgacaaaagtggaagaatataacaagaaagtcagagaaaacccaagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccttatgcaagtatgggagagcaggaagtaagaagaaaatcactgaagttaatcttagaaaagaaactagctattttagagagggcaattgaaagcaatccaggtaatgttgatctgaaactcgccaggttgaaggtttgcacagaattctgggaaccaccagctttgatcaaagaatggcagaagctaattttcatacatcccaataacccagagctgtggaagaaatatcttctgttctgtcaaagtcagttcagtaccttttctgtttcaaaaatcaatggactctatggaaaatgcttgactacgctggcagctgtacaggatggcagcatggtgtcacatcccccactgccaggcacagaagaagctatgctagctatatttattcagcaatgccacttcctgcgacaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaaagggacaggtggaattctttgaacccttttgggatagtggagaaccacgaattggagaaaaaggagcaagaggctggagggcatggatgcaccaacaagaaaagggtggctggattgctgttgacaaacctgatgatgatgatgaagaagagatagatgaagacgaagaaataaaggataaaactctccccaagtggcacatttggctggatattgaatattctcgtgaagcaagacattggctaccttggaggccagacaaaaacaaaaaccaaactgaagaagactgtgaagatccagaaagacaggttttatttgatgatcttggaccatccatgatccagctttctaatccagaccttcaacatcaactgctgtactcatttttgcaattcctgggagtgccatgtataagtaaactctttcctcccaacctctatattgccatggacgaaaataacatctttgacaatgtactttctgatgaaaagccactgacttctattgatgtgccactatctggattcaacagtattggtcatatggacacgatgctaagaggcagacagcatataggccattataaagatggagaggaattcatacagaatgtttttcatgctctatacctgctattttcaggaaaggaaaaatctaacctgtccatttgttggttacagtatgaaatatctaaggtagttcagtgtctccaaacaaaaaacaagaagaagctgaaagcacaagggaggaaaagtaaaaaattggccaagaatctccttaaagcacctgacaaccgaaatgacctttctctttggaaactgtatgcgtacctagaatggctgcttggaaacactgctgatgctaggaaggtatttgacacagctctgagcacagcagagacgggaggattgaagagtcccaagctgtgcagcctcagtctgctttatgctcagctagaagtggaactcctggaaagcctggaaggagctgtcacatcgcgcgctgttcatatattgactaaattgactgaaagtggaccgtatgtgccctataatggacaagtgttatctgttaatgtcctgaaagctcgtaagacgtatgagcatgcactgcaagattatttaaataaaacaccagtttctgatcgggatcaggtcggtgagtctaaccagctggttaacttggttggatgttacgcagtgttccagtacttgaccgttgggattgatgcagcggtattggtatatgcacaggcttcggaaaaacttcaagttcctgctccagagaaatgtgaaaattccggaatgaattctggcgttcaaaatcttcccacagctcttgaagctgtcacactgctgcacacaaatttactcaggttccacatgaaaattagcgtttatcctttgaatcctttgcgagaggccctaacggaggcgctgaggagatatcctagcaaccagtccctctggaggtcgtacatccaggtccaagggaagtctcacagtgctagcaaagcacgaaggttttttgatggtgtcacgaggtctaccagctctttagagccgtggctgtttgcaatccaagcagagcaaatgagaaaaaaacttactgagcacgtccagagatgttggtgaaatatattatactattcctgaaactgggttaacaaataggattatagctctatttgaacatgccactcagagtgaaaatggtacccattgtccactgctatggaggatgtatttgaactttctggtttcagtaggaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]