2025-06-08 22:08:45, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XR_003422692 11060 bp RNA linear MAM 04-APR-2023 DEFINITION PREDICTED: Acinonyx jubatus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X1, misc_RNA. ACCESSION XR_003422692 VERSION XR_003422692.2 DBLINK BioProject: PRJNA923316 KEYWORDS RefSeq. SOURCE Acinonyx jubatus (cheetah) ORGANISM Acinonyx jubatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_069386) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jan 30, 2023 this sequence version replaced XR_003422692.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_027475565.1-RS_2023_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/03/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..11060 /organism="Acinonyx jubatus" /mol_type="transcribed RNA" /isolate="Ajub_Pintada_27869175" /db_xref="taxon:32536" /chromosome="B3" /sex="female" /tissue_type="blood" /dev_stage="adult" /collected_by="Rui Bernardino" gene 1..11060 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106989364" misc_RNA 1..11060 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:106989364" ORIGIN
tcctcgccctgccaggtccccgggtcaagccccagggagtgcgagtgggaaaaaccacacttcccagagtgcaccgcaaccgcgaaggcctcactaccggcgtccgctcgccggcgccatttctggagagggggacggcggtgcggcctgccgtcatggcgctgttcccggcctttgcaggcattggtgagacttccggtagcggcaatgccaggaaagaattagactggctgagcaacccaagcttttgtgctggagccataacctctctgagccaacaaactgaaggggccacagccctggtttctgaagggtcacctctgacaaggagccctctgaaatcagagccttcggatgaaagtgacactaacaaaaagcccaaacaaacaagcagaaaaaagaagaaagagaaaaagaagaaaaggaagcatcaccacaagaaaaccaggagaaaacatgggaggcccagtagcagtgggtctgagccagatagtgattctgaaaaggataaagcttccagaagcattagagacagtaaaaaggaatcagagaaaccaaaccgagaagggaacgccgtcgctgatactgggcaccgctgcgtctggcttgaggacgttcaggctctcacaggggaaaccttcagaacagataagaaaccggatcctgcaaactgggagtataagtctctctaccgaggagatatagcaagatacaagaggaaaggggactcctgccttggcattaaccctaagaagcagtgcatatcctgggagggggctgccacagaaaagaagcactcacacaagcatgtcgagcgctatttcacgaagaagagcgtgggactgatgaacgttgacggagtcgctgttggcggtaaaaccgaacctccctcatctgagccggtctcatttatcccagtgaagggctcggatgatgtggttcctcctgttacgacctggttgaaccctctggggatttacgatcagtccaccacacagtggttacaaggacagggtccttcagagcaagaatcaaagcggccagactcacagacagacagagagcatgccctgctcaaggccaaggtggaggagtttaacaggagagttcgggagaatcccagggatattcagctgtggatggcatttgttgcttttcaggacgaggtcataaagagccctggcctgtatgccatcgaggaaggagagcaggaaaagcggaagcggtctctgaggctcgttctggagaagaagctggccatcctggagcgggccatcgaaagcaaccagagcagcgtggacctgaaactcgccaagctgaagctctgctccgagttctgggagccctccgccctggccaaagagtggcagaaactgatctttctgcatcccaacgatacagccctgtggcagaaataccttttattttgccagagccagtttagcacctttacagtgtcaaaaattcacggtctgtacggcaagtgcttgagcaccttgtctgccgtgaaggacggcagcatcttatcgcaccccgccctgccaggcaccgaggacgccatgtttggtctctttcttcagcagtgccacttcctgcggcaggctggtcactctgagaaggcggtctctctgttccaggccatggtcgacttcaccttcttcaaacccgacagtgtgaaagacctgcccaccaaaggacaggtggaattctttgagcccttctgggacagtggggagccccgggttggcgagaagggcgcccgaggctggagagcgtggatgcaccagcaggagcggggtggctgggtggtcatcagtccagatgatgatgatgatgagccagaagatgaggaccaggaaataagagagaagagtctgcccaggtggcagatctggcttgccaccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaaccgaggaagactgtgaggatccagagagacaggtgctgtttgatgacattgcccagtctatgatccgtctttccagccaggatcttcagtttcagctggttgcggcctttctgcagttcctgggcgtgccttctggcctcagccctccagcctcttgcctctacctggccatggatgagaacagcatcttcgatgacgggcttcatgacgaaatgccactgacttttctcaacctttcctcttctggtgtcagctgtgttggctgctcagacccactgggccgccggcgctggacccggggtcacaatcgagagggcgaggagttcatccgcaacatctttcaccttgtgatgcctttgttttcaggccgggagaggtctcagctctgcttctcttggttacggtacgagatcgagaaggtcatttggtgtctgcacactaaaaacaagaagaggctaaagtcacagggaaagaactgcaagaaactagccaaaaatctcctgaaggagccagaaaaccgcaacagtttttgcctctggaagcagtacgcacatctggagtggctgcttggcaacaccgaggacgccaggaaggtgttcgatgcggctctcagcatggcggggggcagagacctgagggaccgtgagctgtgtgagcttggcctcctctacgccggcctggaggcggagctgttgccggacccgagaggggccgccacggcacgagccattcacgtactgaccaggctgacggagcaggggccctgcgggccctactccgggcaggcgctggctgttcacatcttgaaagctcggaaggcgtacgaacacgcgctgcaggactgtttgggcgacagctgtgtgtctgctccggctcccagcaactccttcgaccgcctgactagcctggtgaaatgcttcatgctctttcagtacttgaccgtagggatcgacgcggccgtgcgggtgtacgagcaggtgctcgcaaaactgaagggctctgttcccccagggggctctgacccggaggacggtgcccgcgcccagggcccccacggtgcgctggaggccgtgatgctgatgcacacgagcctgctcaggttccacacgaaagtcagcctttaccccctggctcctctgcgacaggctctctccgaggcgttaaggttgtacccaggcaaccaggtgctttggcgggcatacgtgcagattcagagcaggtcccacacagccagtgagaccagaagatttttcgacgcggtcaccaggtctaccaaactcttggagccttggttgtttgcgatcgaggccgagaaaatgaggaagagactggtggaaagtgttcagagggtagatggtagagaggtccacgccacaattcccgagaccggcttgacacatcgcatcagagccctgtttgaaaatgcgttgcggagcgacaacggcagccagtgccccttactgtggaggatgtacctgaattttttggtttccttaggaaacaaagaaaggagcaaaggcatgttctacaaagcacttcagaattgtccctgggcaaaggtgctgtacctggacgccgtggagcacttccccgaagagatgcaagaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccgtcgaggagctggcgcttctgctggaggactagaccaggagagaacgggccctgccttccgggcctctcgcctaccccgcccccaacccccccaccggagccgggatgcacaggacggggacacgtgcgtgtgagcatgtgtcacgagacctccgcttttcaagtttcttaattcttagtaatttgggtctgggttatcagtcttttacctcttgcacattgtttggatgtgtgaaggacacaaaaccattgtttacatattgtatatgtgaatttgtgtacgtagggaagaatcctgccaagtgaaaactaaacccgtcgtggctggcgtgcgggaggtctgttccactcctctgcccggccacgaacgttccccactggcacccttggtggtcctgccgtcgtggtaagaaaggtctggtttctgagcactcggacctctccccgcagctggtgaggagagcagcttttgcccttaagagccgtttaaaacttggtgttctggcctcgctcccgttttaaaagtttctcattatttgccaggctcttgatgccacctcccttctgtggaccaggagcatcacctgggggcttgttagaggtgcagcctccagggcccacctcagcccttctgagtcagggcccgcacttgaacaggaccccctggggacttaggtgcaccaagtgtggggggcactgcccaaaggacccctgcggcaggggagtgtgcaggcggccatctgacaagtgcagagtggagccagcgccttcccaccaaacccacccctgcctgggggctgtgacacagaggcccagacccagacctgccaggccacattcttgttttgatttctgagggtatgaatggaacgaaacgtaaatatccacattcagaccactttcttctgaaaaggacacgccttgtagtcattattaaggacactgaactgggaggaaattgctctaccttccctgaggtcctgctctaagagaaacgcggacagctgctgactctatcctgatctctagaacggctgaagttgtatttctttggcatctcatccagagaagcccgtgtcgtggaagagaatcttgcctagaaaccagcggacactggttggggagaagggcggcgggtcagggcacccgaggaaggtggctggccagccaagtggacgcttgcctcgatctgccccgcttccttcgcggcttcaagactgaactgttcaagagaggggagaggtgccggaaatggatgaagaaagggagccacgttcctgggccacagctgccgttacactgggaaacttcgcggcaacagagcacacgtccagttcatctacctacactgaggagagagcatgcgttctggctaaatggaaa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aagcaacaatcacccaatttatttccattacctaactcggtattaacaactacaaaagagcacactggcaagctctgttactgtttgatcagtacagaaaaaacaaaatatgcaaaataactctaagcaccctaaatgaggcagcagtaagaaatctaaagtctaaaaacccagagcccgtgcctagacctaccttaatttcctggatttggttgtccaaccccccaatatcagcataggtttcctggggggccttttctactttcatcaccgtgaccaagggatccgtgtcatccatgagcacccctatgacggcatgtacctacagagaacgttaagttttactgcagggacgtgaggtttacacaatccatttacaacagtgcaatgccagtcaccagaacggcacgaataggcggatctgagaggaaggagaaagcatccctaattcggggcttcgagactggcaacttgccttgtggttgagcaggaccgaacagcctggctccagcaggtccttgtctacaaaggagagaatgctgacgtagtgttctgagcccacagacgtggacacgatggcgtgattgtcatcaatgatctcttccaatgttcctaccgacatcggggtccccctcagatcatccacctttgatctctcctcctatgtaagagtatgccacgaaggaaaagcgggttagacctaaaaagtagacaatgctgacagttttactagagttactagattttactacgtttacaaagcaggtggtgcttttaaaaggcagctaatttatgattcataagagcctgcacaggtcaactgcttgaatttcacttattcactgaattctatttaataactaaaaccgtcaatttgtaaaatcaaagttacagtaatttctcagtttacctcttgcttttcttctaaaggcttcatttgttcctgatttctaatgaattcttcctccatgagaagatagtctttaattctctctaacttcagtaattttaagcggcactgagtgtgaggtgtcactgtaattgaaaaagttttattgta
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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