2024-04-25 08:41:15, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_002640700 3425 bp RNA linear MAM 20-SEP-2017 DEFINITION PREDICTED: Enhydra lutris kenyoni NRDE-2, necessary for RNA interference, domain containing (LOC111148464), transcript variant X3, misc_RNA. ACCESSION XR_002640700 VERSION XR_002640700.1 DBLINK BioProject: PRJNA407952 KEYWORDS RefSeq. SOURCE Enhydra lutris kenyoni (northern sea otter) ORGANISM Enhydra lutris kenyoni Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Lutrinae; Enhydra. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_019154104.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Enhydra lutris kenyoni Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3425 /organism="Enhydra lutris kenyoni" /mol_type="transcribed RNA" /isolate="GAN:26980312" /sub_species="kenyoni" /db_xref="taxon:391180" /chromosome="Unknown" /sex="male" /tissue_type="blood" /dev_stage="adult" gene 1..3425 /gene="LOC111148464" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:111148464" misc_RNA 1..3425 /gene="LOC111148464" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X3" /db_xref="GeneID:111148464" ORIGIN
gaacggcagtgcggcctgtaatcatggcgctgttcccagcctttgctggcattggtgaggctcccaatagcggcagcgccaggaaagaattagattggctgagcaacccgagcttttgtgttggagccataccctctctgagccaacagcctgaggaggccactgccctggtttctgaagggtcatcgccgacgaggagtcccctgaaatcagagccttcagatgaaagtgatgctaacagaaagcccagacaaacgagcaggaaaaagaagaaagagaagaagaagaagaggaagcatcaccacaagaaaaccaagagaaaacgtgggcaggccagtagcagtggctctgagccagatagtgagcctgaaaaggacaaaacttccagaagcactggagacagtagaagggaatctgagaagccaaggcaagaaggtcatgctgctgatgatgttgggcgtcgctttgtttggcttgaggacgtgcaggctctaacaggagaaaccttcagaacagacaagaaaccggatccggccaactgggagtataagtccctctaccgaggagacatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcctgggagggggcttccacagaaaagaagcattcgcacaagcatgttgagcgctattttacgaagaagagcgtgggactgatgaacattgatggagttgccattggcagcaaaaccgaacctccgtcatctgagccgctctcctttatccccgtgaagggcccagatgatgcgcttcctccccttacgacctggttgaaccctctgggcatttacgatcagtccaccactcagtggttacaaggacagggtccttcagagcaagaatcaaagcagccagactcacagacggacagagagagcgcactgctcaaggccaaggtggaggagttcaaccggagagtgcgcgagagtcctcgcgacgtgcagctgtggatggcctttgttgcttttcaggatgaggtcatgaaaagccccggcctgtacgccctcgaggagggagagccggagaagcggaagaggtctcggaagctggtgctggacaggaagctggccatcctggagcgggccatcgagagcaaccagagctccgtggagctgcagctggccaagctggagctgtgtgccgagttctgggagccctccgcgctgctcagggagtggcagaagctgatattcgtgcaccccaacaagacggccctgtggcagaagtaccttttattttgccaaagccagttcagcaccttcaccgtcgccaagatccacggtctctatggcaagtgcttgagcacgctgtccgcggtgctggacggcagcatcctgtcgcaccctgcgctgcccggcacggaggaggcggtgttcggtgttaaccaggacccctccttgctgtccccgctttcagctctctatcttcagcactgccacttcttgcggcaggccggccactcggagaaggccgtcgctctgttccaggccatggtggacttcaccttcttcaaacctgacagcgtgaaagacctgcctaccaaaggacaggtggagttctttgagcccttctgggacagcggggagccccgggctggggagaagggcgcccgaggctggagagcgtggatgcagcagcaggagcgaggcggctgggtggtcatcagtccagatgatgaggaggaggagccagaagacgaggaccaggaaatacgagataagagtctgcccaggtggcagatctggcttgccgctgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaggaagcaaaccgaggaagactgcgaggacccagagagacaggtgctgttcgatgacatcgcacagtctctgatccagctctccagcctggatcttcagttccagctggtcacggcctttctgcagttcctgggtgtgccttgtggcttcagcaccccggcctcctgcgtctacttggccatggatgaggacagcatctttgataacgggcttcatgatgaaaagccactgactttcctcaacctgtccttcaatggcatcagctgtgttggccgctcagaccccctgggctgccgtcgctggacccgcggtcacagtcgagagggcgaggagttcatccgcaacgtctttcaccttgtgatgcctctgttttcaggccaggagcggtcccagctctgcttctcctggctacggtacgagatggcgaaggtcatttggtgtctgcacactaaaaacaagaagaggttaaagtcacaaggaaagaactgcaaaaaactcgccaaaaatctccttaaggagccagaaaaccgcaacgatttctgcctctggaagcagtatgcacatctggagtggttgctcggcaacacggaagacgccaggaaggtgtttgactcagcgctcagcctggcgggtggtggggaactgagggggtccgagctctgggagctcggcctcctctacgcgcagctggagctggagctggagctctcggctgaggtgaggggggccgccgcagcccgggccgtgcacgtactgaccagactgacggagaatgggccctatgggccctacttggggccggtctcggccgttcatgtcctgaaagcccggaaagcttacgagcacgcgctgcaggactgcctggggcagagctgtggctccgctccagctcccgctggccccactcaccgcctcgtgagcctggccaagtgcttcctgctcttccagtatgtaactgtaggcatcgaggccgccgtgcggctctacgagcagggtccacgtttaccccctggctcccctgcgccaggtgctctcagaggcgatacagctgtacccagacaaccagcttctctggagggcctacgtacaggttcagagcaagtcccacgcagccagtaagaccagaaggttcttcgatgctgttaccaggtccgccaaagccttggagccttggttgttcgcgattgaagctgagaaaatgaggaagaggctggtggagaccgttcagagggtggatggcagagaggtccatgcgacgattcctgagaccggcttggctcatcgggtcagagccctgtttgaaagcgcgttgcagagtgaccatggccgcctgtgccccttgctgtggagaatgtatttgaactttttggtttccttgggaaacaaagaaaggagcaaaggcgtgttctacaaagcacttcagaattgtccttgggcaaaggcgctgtacctggatgccgtggagcacttccccgaagagatgcaggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccctggaggagctggcgcttctgctggagga
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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