2024-03-28 23:33:36, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_002417848 3949 bp RNA linear VRT 24-MAY-2017 DEFINITION PREDICTED: Columba livia NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, misc_RNA. ACCESSION XR_002417848 VERSION XR_002417848.1 DBLINK BioProject: PRJNA217047 KEYWORDS RefSeq. SOURCE Columba livia (rock pigeon) ORGANISM Columba livia Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Columbiformes; Columbidae; Columba. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_004973385.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Columba livia Annotation Release 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3949 /organism="Columba livia" /mol_type="transcribed RNA" /db_xref="taxon:8932" /chromosome="Unknown" /sex="male" /tissue_type="blood" /country="Denmark: Vordingborg" /collection_date="13-Jun-2010" /breed="Danish Tumbler" /note="bred by Anders Christiansen, Hans Ove Christiansen, and certified by Danmarks Racedueforeninger" gene 1..3949 /gene="NRDE2" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns" /db_xref="GeneID:102089446" misc_RNA 1..3949 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X2" /db_xref="GeneID:102089446" ORIGIN
tggccttgttgaacttcatgaaggtcacacaggcctacctctcaagcctgttaaggtccctctggatggtatcgcttccctccagcatgctaactgcaccacacagctaggtgttgttgggggagtgcactccatcccactgttcatggccccaacagagaagttaagcagcactgatcccagtactgagctctgaggaaccccactcatcactggtcttcacttgtagattgagctgttgaccacaactctttaagtgtgaccatccagcccattccttatcaaccaagtggtccatcagtcaaatccatgtctctccaatttagagatgagggtgttatgcgggacagtgtcaaatgctttgcgcaagtccacgtagattatgtcattggctcttgccttatctactaacgctgtaactgcgttgcagaaattcgtcaggcacgatttgctcttagtgaagccatggtgactcttgccaatcaccttatttttcatgtatttttcttgatgagtttaactcaggttaacagactgttttgcagcctgctctatttttaatccttttgtggacaacagttcagcgatatgagatggaagaaagagttttggtatgaagagctatttctgaaagaaatactttagaaggagaagagatatatggcttggcagacaatgagttcatgctatttaaggattagagaattggactggcttagtaacccaagcttctctgcggaagatgcactgttactgcatcagcgcactacggaagttgcaaatctcatccctgagaaaccaccactaataaggactccttcaagatcagagttgtcaggggaaagtgatacagatgagagtctgaaacgggcaagtaagaaaagaaaaaagcaaaagaaaaagcatcaccactacaagaagacaaaaaagaaaaccaaaggggactccagtagcagtgagtcggacctggacactaagcacatcaaggacaaagctgcacgaagctccagaaatcacgaaaaggaagcagcagcaaacctagataagaaaacatcaaatcttaccagcaatcgctttgtttggcttgatgatgtccaggctttcacagcagaaaccttcaggatagacaagaaaccagaccctgcaaactgggcctacaaatccttgtatcgaggagacatagcaaggtataaaaggagaggagagtcctgtcttggcatagatgcaaagaaacagtgtataacttgggagagttctgcatcaaaaaagaagcaattgcagaggcaccctgagcgctacttcacaaaaaacaatgtgaagatactgaacacagatgggattcctgtttgcaagaaaagttcttcatctgaccccactgcttttataccagtttttgaaacggaaactgatgatccttctggcacagtggaggtaaattctcttgggatatatgatccgtcagctacagtgcagctacaagaaaaagggtgcagggctgcagaccatgatcctgtaaatacacagcaaacaattcaagagcctgggataaatatcaactccaccctaatgacgaaagtggaagaacataacaggaaagtcagagaaaacccaagagatattaatgcttggatggaatttgtttcttttcaggatgaattaatgagaggatctaacctttatgccagcaagggagagcaggaagtaagaagaaaatcactgaagttaatcttggaaaagaaactggctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgccaggctgaagatttgcactgaattctgggaaccaccagctttgatcaaagaatggcagaagctaattttcttacatcccaataatccagagctgtggaagaaatatctcctgttctgtcaaagtcagttcactacgttttctgtttcaaaaatcaatagtctctacggaaaatgcttgacgacattggcagctgtacaagatggcagcatggtatcgcatcctctgctgcctgggacagaagaagctatgctagctatatttattcagcagtgccacttcctgagacaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaaggggacaggttgaattctttgaacccttttgggatagtggagaaccacgaattggagagaaaggagcaagaggctggaaagcgtggatgcaccaacaagaaaagggtggctggattgctgttaagcctgatgatgatgatgatgaagagatagacgaggatcaagaaataaaggataaaactctccccaagtggcacatttggctggatattgaatattctcgtgaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaaaccgaagaagattgtgaagatccagaaagacaggtattatttgatgatcttggaccatctttaatccgtctttctaatccagatcttcaacgacaactactgtactcatttttgcaattcctgggagttccatgcacaagtaaactctttccttccaacctctatattgccatggatgaaaataacatttttgacagtgtgctttctgatgaaaagccactgacttttgttgattttccgctttctggattcaacagtattggtcatatggacacgatgctacgagagagacatcacataggccactgtaaagaaggagaggagttcatacacaatgttttccatgttctatccctgctgtttacaggaaaggaaaagtgcaacctgtccatttgttggttacagtatgaaatatcgaaggtcattcagtgtctccaaacaaaaaaaaagaagaagctgaaaatacaagggaggaagagtaaaaaattggccaagaatctccttaaagcaccggacaaccgaaatgacctttctctctggaaactatacgcctacttagagtggctgcttggtaacactgatgacgccaggaaggtgcttgacacggctctttgcacagcagggacaggagggttgaagagttcccagctctgcggcctcggtctgctttatgctcagctggaagtggaactactagaaagtctagaaggagctgttatgtcacgtgctgttcatgtgttgaccaaattggctgaaagtggactatatgtaccctatagtggacaagtgttacctgtgaatgtcttgaaagctcgtaaaacatatgagcatgcactgcaagattatttaggtaaaacaccggtttctgatcaggatcgggtcagtgatactaatcagctggttaacttggttggttgttacgcactgttacagtatttgactgttgggattgatgctgcagtattaatatatgcacagacttcagaaaaacttgaagctcttggtccacagaaatgtgaaaatactggagagaattttggcattcaaaattttcccactgctctggaagctgtcacactgctgcatacaaatttactcagattccacatgaaaattagcgtttatcctttgaatcctttgcgagaggcactaacggaggctctgaaacggtatcctagcaaccagtctctttggaggtcatatatccacatccaaagaaagtctcacagtgctagcaaagcacgaagattttttgatggtgtcacaaggtctactgattctttagagccatggctgtttgcaatccaagcagagcagatgagaaaaagactcattgagaatgtccagaggtgctggtgaaatacattccactattcctgaaactgggttaacaaatcggattatagctctgtttgaacatgcagttcagagtgaaaatggtgcccattgtccgctgctgtggagaatgtatttgaactttctggcttcagtaggaaac
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]