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Previous release (v1)
2025-12-08 10:47:50, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_457724 1059 bp mRNA linear PLN 20-APR-2018
DEFINITION Debaryomyces hansenii CBS767 DEHA2C01034p (DEHA2C01034g), partial
mRNA.
ACCESSION XM_457724
VERSION XM_457724.1
DBLINK BioProject: PRJNA12410
BioSample: SAMEA3138183
KEYWORDS RefSeq.
SOURCE Debaryomyces hansenii CBS767
ORGANISM Debaryomyces hansenii CBS767
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Pichiomycetes; Debaryomycetaceae; Debaryomyces.
REFERENCE 1 (bases 1 to 1059)
AUTHORS Dujon,B., Sherman,D., Fischer,G., Durrens,P., Casaregola,S.,
Lafontaine,I., De Montigny,J., Marck,C., Neuveglise,C., Talla,E.,
Goffard,N., Frangeul,L., Aigle,M., Anthouard,V., Babour,A.,
Barbe,V., Barnay,S., Blanchin,S., Beckerich,J.M., Beyne,E.,
Bleykasten,C., Boisrame,A., Boyer,J., Cattolico,L.,
Confanioleri,F., De Daruvar,A., Despons,L., Fabre,E., Fairhead,C.,
Ferry-Dumazet,H., Groppi,A., Hantraye,F., Hennequin,C.,
Jauniaux,N., Joyet,P., Kachouri,R., Kerrest,A., Koszul,R.,
Lemaire,M., Lesur,I., Ma,L., Muller,H., Nicaud,J.M., Nikolski,M.,
Oztas,S., Ozier-Kalogeropoulos,O., Pellenz,S., Potier,S.,
Richard,G.F., Straub,M.L., Suleau,A., Swennen,D., Tekaia,F.,
Wesolowski-Louvel,M., Westhof,E., Wirth,B., Zeniou-Meyer,M.,
Zivanovic,I., Bolotin-Fukuhara,M., Thierry,A., Bouchier,C.,
Caudron,B., Scarpelli,C., Gaillardin,C., Weissenbach,J., Wincker,P.
and Souciet,J.L.
TITLE Genome evolution in yeasts
JOURNAL Nature 430 (6995), 35-44 (2004)
PUBMED 15229592
REFERENCE 2 (bases 1 to 1059)
AUTHORS Casaregola,S., Val,M.E., Neuveglise,C., Talla,E., Martin,T.,
Durrens,P., Barbe,V., Bleykasten,C., Bon,E., Despons,L.,
Fritsch,E., Groppi,A., Iragne,F., Jauniaux,N., Leh,V., de
Montigny,J., Pottier,S., Straub,M.L., Wirth,B., Wincker,P.,
Sherman,D.J., Gaillardin,C. and Souciet,J.L.
TITLE The second release of the complete genome of Debaryomyces hansenii
type strain CBS767
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 1059)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (20-APR-2018) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 4 (bases 1 to 1059)
AUTHORS Genoscope -,C.E.A.
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2008) Genoscope - Centre National de Sequencage :
BP 191 91006 EVRY cedex - FRANCE (E-mail : seqref@genoscope.cns.fr
- Web : www.genoscope.cns.fr)
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_006045).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..1059
/organism="Debaryomyces hansenii CBS767"
/mol_type="mRNA"
/strain="CBS767"
/type_material="culture from type material of
Saccharomyces hansenii"
/db_xref="taxon:284592"
/chromosome="C"
gene <1..>1059
/locus_tag="DEHA2C01034g"
/db_xref="GeneID:2900579"
CDS 1..1059
/locus_tag="DEHA2C01034g"
/note="similar to uniprot|Q96V44 Trichoderma reesei
L-arabinitol 4-dehydrogenase (EC 1.1.1.12)"
/codon_start=1
/transl_table=12
/product="DEHA2C01034p"
/protein_id="XP_457724.2"
/db_xref="GeneID:2900579"
/db_xref="GOA:Q6BVP5"
/db_xref="InterPro:IPR002085"
/db_xref="InterPro:IPR002328"
/db_xref="InterPro:IPR011032"
/db_xref="InterPro:IPR013149"
/db_xref="InterPro:IPR013154"
/db_xref="InterPro:IPR016040"
/db_xref="UniProtKB/TrEMBL:Q6BVP5"
/translation="
MTTKQNIGVFTNPKHELYVTEIDTPQAADLTEDEVLVHVKCTGICGSDIHFQKHGCIGPTMVVEGEHILGHESSGEILAVGNKVTNLKTGDKVALEPGVPCKSCKACLTGKYNGCEKVLFSSTPPVAGFLRRYIKHPAQFCHKINSLTYQQGALLEPLSVSYCGVRHIGLQLGQSVLVCGAGPIGYVTAKCAESAGAFPIVVTDIEQSKLDFIKKEIPSVTTVLVTGSLQENLKKVASATESFDVAIDCTGVEPSLELATHALDFGGKLHIIGVGREFQKFPFMILSVKEIHVTFQYRYANTWPTVVKLMQAGIINLDKLITHSFALEDAEEAFKLAADPKSGAMKIIIEDA"
misc_feature 40..1053
/locus_tag="DEHA2C01034g"
/note="Sorbitol dehydrogenase; Region: sorbitol_DH;
cd05285"
/db_xref="CDD:176188"
misc_feature order(133..135,139..141,151..153,169..171,181..183,
211..213,358..360,367..369,466..468,820..822,889..894)
/locus_tag="DEHA2C01034g"
/note="inhibitor binding site [active]"
/db_xref="CDD:176188"
misc_feature order(133..135,139..141,211..216,466..468)
/locus_tag="DEHA2C01034g"
/note="catalytic Zn binding site [ion binding]; other
site"
/db_xref="CDD:176188"
misc_feature order(301..303,310..312,319..321,343..345)
/locus_tag="DEHA2C01034g"
/note="structural Zn binding site [ion binding]; other
site"
/db_xref="CDD:176188"
misc_feature order(478..480,544..552,607..615,625..627,673..675,
745..750,754..756,814..822,886..894)
/locus_tag="DEHA2C01034g"
/note="NADP binding site [chemical binding]; other site"
/db_xref="CDD:176188"
misc_feature order(484..486,517..519,523..525,571..573,580..588,
592..594,619..621,670..672,712..714,913..915,922..927,
934..936)
/locus_tag="DEHA2C01034g"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:176188"
ORIGIN
atgaccaccaaacaaaatattggggttttcacaaatccaaaacacgaactttacgtcacagaaattgatactccacaagctgcggatcttacagaggatgaagtattagtccatgtcaaatgtacaggtatctgtggttcagacattcactttcaaaagcatggatgtataggaccaactatggtggtcgagggcgaacatatattagggcacgaatcgtctggggaaattttggctgtgggtaacaaagttaccaatttaaaaacaggtgacaaggttgctcttgaaccgggtgttccatgcaaatcttgtaaggcctgcttaaccggtaaatataatggatgcgagaaagtgttgttctcctctactccccctgtggcagggtttttgagaagatacatcaagcatccagctcaattttgtcacaagatcaattctctcacctatcagcaaggtgctctcttggaacctctctcagttctgtactgtggagtgagacatattggacttcaattaggacaatcagtacttgtatgtggggcaggtcctattggttatgtaacggcaaaatgtgcggaactggctggagcgttcccaatcgttgtaactgatattgaacagtctaaacttgactttattaaaaaggaaatcccaagcgtcaccactgttcttgttactggctctttacaagaaaacttaaaaaaggtagcatctgcgacagagagcttcgatgttgccattgattgcacaggtgtagagccatcactcgagcttgcaacacatgcccttgatttcggcggaaaattacatatcatcggggttggtagagagttccaaaaattcccttttatgatcttgtctgttaaggaaattcatgtaactttccaatatagatatgccaacacctggcctactgttgtaaagttgatgcaagcaggcatcattaatttagacaaattgattacccattcatttgcattagaggatgccgaagaggcctttaagttagcagctgaccccaagtcaggggcgatgaaaattattatcgaagatgcataa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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