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2025-09-14 19:20:23, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       XM_074913595            6147 bp    mRNA    linear   VRT 01-JUL-2025
DEFINITION  PREDICTED: Athene noctua ATPase copper transporting beta (ATP7B),
            mRNA.
ACCESSION   XM_074913595
VERSION     XM_074913595.1
DBLINK      BioProject: PRJNA1281187
KEYWORDS    RefSeq.
SOURCE      Athene noctua
  ORGANISM  Athene noctua
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Strigiformes;
            Strigidae; Athene.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_134037) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_965140245.1-RS_2025_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/27/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6147
                     /organism="Athene noctua"
                     /mol_type="mRNA"
                     /db_xref="taxon:126797"
                     /chromosome="1"
                     /geo_loc_name="United Kingdom:Stretham|Ely|Broad Baulk"
                     /collection_date="2021-07-09"
     gene            1..6147
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:141963879"
     CDS             30..4325
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2"
                     /protein_id="XP_074769696.1"
                     /db_xref="GeneID:141963879"
                     /translation="
MKHHFAFDNMGYEESFETVPSPSSQEQTVAVNIVGMTCQSCVQSIEGRISKVKGIVSIKVSLEQNNAVIKYLQTEINPEQICQEIQDMGFDANIAEERLTTATVNSSCLREAVVKLRVEGMTCQSCVTNIEGKIRKLHGVAKIKVSLGNQEAIIAYYPYIIQPDDLKSHISNLGYDCTIKSKSAPLKLGVLDLERLQNANPKEIPASLESDRVDPLVAEMSSTATMALRIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKCAVVQYSPNLITLSALKQAIESLPPGNFKVCFLNGSEANKGASPSPALLYDLFREPLQDMTCTAVVKIDGMTCNSCVQSIEGAISQRQGVQRIAVSLAGRTGTIHYDPAITNGEELRAAIEEMGFDASVLTDTAAGECRHQPDTSNAAVQPQPPESSHQDCASDALPDSPHLDGPKEHSRLTAEKCFLQITGMTCASCVSTIERNLQKEDGIVSVLVALMAGKAEIKYKPDFIQPLEIAQLIQNLGFEATVIEDHAETEGNVELLITGMTCASCVHNIESKLMRTNGIFYASVALATCKAHIQFDPEITGPRDIIKIIEEIGFHASVAKRVPNAHNLDHKKEIQQWRKSFMCSLLFGIPVLILMIYMLIPDGEHHGSMVLEQNLIPGLSILNLLFFVLCTFVQFLGGWYFYVQAYKSLKHKTANMDVLIVLATTIAYVYSCVILMVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGPDHSIVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTVTLIVWITIGFINFDVIQKYFPNQNKHVSKAELILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRVLLLGDTAVLSLKKVLAVVGTAEASSEHPLGVAVTKYCKEELGSQSLGYCTDFQAVPGCGISCKVGGVEAVLDMTEEGIDNLDTNRSRDSSAPLGDNALIMLSKSHGSSASHTYSVLIGNREWMQRNGLHIANDVNDAMTDHETKGQTAILVAIDGVLCGMIAIADTVKQEAALAVHTLKNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQNGRKKVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLILALIYNLLGIPIAAGVFMPVGLVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDTESYEAQAQGRMKPLTPSQISVHIGMDDRRRDSSRSAPWDQISQVSLSSLTSDKLPRRNGFVEEEGDKWSLLMNGGDEEQYI"
ORIGIN      
ctcctcctggctgtgagctggagcctacaatgaaacaccattttgcttttgacaacatgggctatgaggagagctttgaaactgtgccctctccatcttcccaagaacaaaccgtggcagtcaatattgtgggaatgacttgccaatcatgtgtgcagtcgatagaaggccgaatttccaaggtcaagggcattgtgagtattaaagtctcccttgaacagaacaatgctgtaataaagtatctgcagacagaaataaatcctgaacagatttgccaggaaattcaggatatgggctttgatgccaacatagcagaagagagattgacaacagcaactgtaaattcgtcatgcttgagagaagcagtagttaagcttcgggtagaaggcatgacgtgccagtcctgtgtcaccaacattgaaggaaagattaggaaactgcatggtgtggcaaaaatcaaggtgtcacttggtaaccaggaagcaattattgcttactatccttacatcattcagcctgatgacctcaagagccatatcagtaacctggggtatgactgcaccattaaaagtaaatcagcccctttgaagctgggtgtcctcgatctggagcgcttgcagaatgcaaaccccaaggagataccagcaagtcttgagagtgatcgagtggatcccctggtcgctgagatgagtagcacagctacaatggctctacggatagaaggcatgcactgcaagtcctgtgtcagaaacattgaaggaaatatatcagatcttcctggcatacaaagtattaaagtgtctttggagcataaatgtgctgtggtacagtatagcccaaatctaattaccctgtcagctttgaagcaagctattgaatcccttccacctggaaactttaaagtatgcttccttaatggttcagaagcaaataaaggagcatctccatcacccgctttgctatatgatctcttcagagagccactgcaagacatgacatgcacagctgttgttaagatcgatggcatgacctgcaattcttgtgtacagtctatagaaggggctatatcacagagacaaggagtgcaacgtatagcagtttctctagccggcagaactgggaccatacattatgatccagctattactaatggagaagagttaagagctgccatagaagagatggggtttgatgcttctgtgctgacagataccgccgctggagaatgtaggcaccagcctgataccagcaacgctgctgtgcagcctcaacctccagagtcttctcaccaagactgtgcctcggatgctcttccagacagtcctcaccttgatggaccaaaagagcacagcagactgacagctgaaaagtgttttttacaaatcacgggcatgacctgtgcatcatgtgtatctaccattgaaagaaatttgcagaaagaagatggaattgtttcagtgttagtagcactgatggcaggtaaagcagagataaaatacaagccagattttatacagcctcttgaaatagcacagctgatccagaatttgggttttgaagctaccgtcatagaagatcatgcagaaacagaagggaatgtggagcttcttattacagggatgacttgtgcttcttgtgttcacaatattgaatctaaactcatgagaacaaatggcatattttatgcctcagttgcacttgctacttgcaaagctcacatccaatttgatcctgaaatcactggacctcgagatattataaaaataattgaggaaattggctttcatgcttccgtggctaaaagagttccaaatgcacataacctggatcataaaaaggaaatacagcagtggaggaaatctttcatgtgcagcctcttgtttgggatccctgtcttaatcctaatgatttatatgctaatacctgacggtgagcaccacgggtctatggtgctggaacagaatctcattcctggattatctattttaaatcttctcttcttcgtcctgtgcacttttgttcagtttcttggtggatggtatttttatgtacaagcttacaaatcactgaagcacaagacagccaatatggatgtgctcatcgtactggccacgacgattgcttatgtatattcatgtgtgatcctgatggtagcaataattgaaaaggcagagaaaagccctgtcactttctttgacacccctccaatgctgtttgtgttcattgcccttggaagatggctggaacacatagcaaagagtaagacctcagaagctcttgctaaacttatatctcttcaagccacagaagccactgtagtgactcttggacctgaccactctatcgtcagggaggagcaggtagctgttgaactggttcaaaggggtgatattgtaaaggttgttcctggtggaaagttcccagtggatggaaaggtcattgaaggcagttctatggcagatgagtctctcattactggggaagctatgccagtcactaaaaagcctgggagcacagtgattgctggttctataaatgcacatggctcagttcttgttaatgcaactcatgttggtaatgataccactctggcacaaattgtgaaattggtggaagaagctcaaatgtcaaaggcacctatccagcaactggcagataagtttagtggatattttgttccatttatcatcatcatttcaacagtgacattgatagtatggatcacaattggttttataaattttgatgttattcaaaaatattttcctaatcagaacaaacatgtttcaaaagctgaattaatactgaggtttgcatttcaaacctcaatcactgtgctgagcattgcatgcccctgttctttaggcctggctacccccacagctgtgatggtgggcacaggagttgctgcgcagaatggtattctcatcaaaggtggaaaacccctggaaatggcacacaagatcaagactgtgatgtttgataaaactgggaccatcacctgtggagttcctaaagtcatgagggtgcttttgctaggagacacagctgtgctctctctgaagaaggtactggcagtggttggcactgcagaagccagcagtgagcatcctttaggagtggcagtcactaaatattgcaaagaggagcttggctctcagagcctgggatactgcactgatttccaggcagtcccaggctgtggcatcagctgcaaagtcggaggtgtggaggctgtcctggacatgactgaggagggtattgataatctggacactaacaggagcagagacagcagtgctcctctgggagataatgcattgatcatgctctccaaatcacatggttcatcagcttctcatacatactcagtgctgattggaaatcgtgagtggatgcaacgcaatggcttgcatattgcaaatgatgtaaatgatgcaatgacagaccatgaaacaaaaggacagactgccatactagtggctatagatggtgtgttgtgtggaatgatcgcaatagcagacactgtcaagcaggaggctgcccttgctgtgcacacactgaaaaacatgggaatagatgtggtgctgataacaggggacaacagaaaaactgcaaaagccattgctactcaggttgggatcaaaaaagtctttgctgaggttcttccttctcacaaggttgcaaaagtccaggagctccaaaatgggaggaagaaggttgcaatggttggtgatggagtcaatgattcccctgcactagccagggccgacgttggaattgcaattggaactggtacagatgttgctattgaagcagcagatgttgttcttatccgaaatgacttgctggatgtagttgccagtattcacttatcaaagagaacagttcgaagaatacgaataaatctcattcttgccttaatttataatctgcttggaatacccatagcagcaggtgtgttcatgcctgttggcctcgtgcttcagccttggatgggatcagcagcaatggcagcttcttctgtctctgtcgtgctgtcttccctgcagctgaaatgttataagaagccagatacagaaagttatgaagcacaagctcaaggccgcatgaagccacttactccttcccaaatcagtgttcatattggaatggatgataggaggagggattcatccagatcggctccttgggatcagattagtcaagtttctctctcttccttgacttcagacaagttgccaagacgtaatggttttgttgaggaggaaggggacaagtggtctttgctcatgaatggaggggatgaagaacagtacatctgaagcactgtattcttactactggaggaaatgttcctctttactagtgacaggagggaccaacttatttcatcaggagcttcaagactgtaagtgaagtcattccttcagctcacaaaacaattgcaactcagctcaatattgggttgtatggattgtggattttttttcaggtcaccagttatttctagtcatggaaagaatctgtggctctttaatgaactgtgcagtttgcacacagcaattagtgaaataatgtaaaatttgtcattttcagagtctaaaagagtttctcttatctggacggcttgctgggcaccaaattctatacttttgctcattctaactttattctttcaagagtacatgaagcaaaagtattttcagagctgccaaatattaatttctctgtccaagtgaaaatatctatggcgtaaggatctctgtggccagaagttgtatctttacacaaaatcctgactagtcacataactgtgagagcactttgtatttgggattcatgtgcatctccttggaccaaaaatgctttggtgtttcactgactataactctgtgaaaagtctctttcaaagattttcacttgctttccggtattgcatccttttgatgcacatttccattgctaaacttgttctgtcattcccactgctctcctagattttctcttttgctccatgagagctctttttttccccctttgcacaagatatcttctgtgagtcattactatgtttacagatattcctgtttgggacaaactcctttaagtcaccagaacttttctgttcctattgaagtccacaaaggcagagcaattcctggtccaagtcagcatataattttcctgtggatactttgcaggaccccatgaagctcctgacaattgggaagttgtctgtctcttccctctgacacagtgaagaatttatgccagtgtgagcaaatgtggtatttaccatgatgcaaatgagagcagaactagcactggtgtgactccagcatggctgaaaggagtgagtttattgcataagttaactctagcttgctagttgcttaaaatggagccaaaagtttaaatgataaaggtggaaaaatgtccttaaaatgtggggcttccatttgctaccatataaataaccttttctgatgacagaaggactcaaactaagaagatttgtaatatcttgaattttaatgtaaatttgtgttcatgctctgaattagttttaatttccctatttctctagtttccttagaaatcaaggtgctgaacaacccttttttcactttaatgtctttaccaaagcttgcagtaactttatcagtgtgaaagtcaaattaatcccttaacactttttagtcaggacagtaggaatcaacagctttggagcactgaatctggtcccgtggtgctgtgttgctcaattgtgggactttgaagcaggcagactggagttttatagcctaatctaaaaagtgaaagaacaggaattactgtgctaagcaatgtgaaataaccgcttaatttcactgacttaaagacagaactatttctaacacaggttcaaatcctgctcctcctaatgtaaaaatgaaaaacaagtgagagaggaaaagaattgtgcttgaagcattgagcaggtcttcctattccctcttcctctacagttttaaaactgtaaaatctttttacatttgtagagatcacttccacagcacacacacttttcaaacatcctgtagcttcctatacatgtccctgtggggaagatagtctattgtttcacgcttttatgttttctta
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]