2025-08-29 22:30:36, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS XM_074736329 538 bp mRNA linear PLN 25-JUN-2025 DEFINITION PREDICTED: Curcuma longa uncharacterized LOC141848280 (LOC141848280), transcript variant X1, mRNA. ACCESSION XM_074736329 VERSION XM_074736329.1 DBLINK BioProject: PRJNA1277305 KEYWORDS RefSeq. SOURCE Curcuma longa (turmeric) ORGANISM Curcuma longa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Zingiberaceae; Curcuma. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133877) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_044706935.1-RS_2025_06 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.4 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 06/19/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..538 /organism="Curcuma longa" /mol_type="mRNA" /cultivar="G26" /db_xref="taxon:136217" /chromosome="17" /tissue_type="leaves" /ecotype="Majalengka, Jawa Barat" /geo_loc_name="Indonesia" /lat_lon="6.9163 S 107.7713 E" /collection_date="2023-08-23" /collected_by="Institut Teknologi Bandung" /genotype="G26" gene 1..538 /gene="LOC141848280" /note="uncharacterized LOC141848280; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:141848280" CDS 77..451 /gene="LOC141848280" /codon_start=1 /product="uncharacterized protein LOC141848280" /protein_id="XP_074592430.1" /db_xref="GeneID:141848280" /translation="
MGSLSRTYKVAGTSSTTSPVVTSQIHSLTEEVTHLKGLLEQRDQEMIRRDEEMKKRDNEIKKLQRQQSRILQHFQLQSLLGDDDDDDDDHDDASDDGGFCKQIKKKRRIKDSDEESSRVSGGPR"
ORIGIN
gccctcagttggcaatgaattgagtctgtggttggaggcgagtgggggatgcaaagggggtggaaggattttgggtatgggttctttgagcagaacctataaagttgctggtacctcttccaccacctcccctgttgtcacatcacagattcatagtttgactgaggaggtaacccatttgaaagggttattagaacaaagagatcaagaaatgataagaagagatgaagaaatgaaaaaaagagataatgaaattaaaaaattgcaaagacaacaatctcgcatcttgcaacattttcagttgcaatctcttcttggtgacgacgacgacgacgacgacgaccacgatgacgccagtgacgatggtggtttttgtaaacaaatcaaaaaaaaaaggcgaataaaagatagtgacgaagaatccagtagagtttctgggggaccacgatgatcttcttcctatcttttattcatatctcatctgatttgtttagactttgtatggattagttggatttttctgatactttgactttgt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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