LOCUS       XM_074585493            4583 bp    mRNA    linear   VRT 21-JUN-2025
DEFINITION  PREDICTED: Larus michahellis NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X4,
            mRNA.
ACCESSION   XM_074585493
VERSION     XM_074585493.1
DBLINK      BioProject: PRJNA1279210
KEYWORDS    RefSeq.
SOURCE      Larus michahellis (yellow-legged gull)
  ORGANISM  Larus michahellis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Laridae;
            Larus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_133899) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_964199755.1-RS_2025_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/20/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4583
                     /organism="Larus michahellis"
                     /mol_type="mRNA"
                     /db_xref="taxon:119627"
                     /chromosome="4"
     gene            1..4583
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 90 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:141742666"
     CDS             1034..3853
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2 isoform X3"
                     /protein_id="XP_074441594.1"
                     /db_xref="GeneID:141742666"
                     /translation="

MLNTDGIPVCNKSSPSDSTAFIPVFQMETDDFSDTTEVNPLGIYDPSTTGWLQGKECKGAEHEPVNTQQTMQKPGININSILMTKVEEHNKKVRENPRDINAWMEFVSFQDELMRGPSPYASKGEQEVRRKSLKLILEKKLAILERAIESNPSNVDLKLARLKLCTEFWEPPALIKEWQKLIFLHPNNPELWKKYLLFCQSQFTTFSVSKINSLYGKCLTTLAAVQDGSMVSHPLLPGTEEAMLAIFVQQCHFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGEPRIGEKGARGWKAWMHQQEKGGWIALKPDDDDDEEEIDEDQEIKDKTLPKWHIWLDIEYSREARHWLPWRPDKTKKETEEDCDDPERQVLFDDLGPSLIRLSNPDLQRQLLYSFLQFLGVPCTSKLFPSNLYIAMDENNIFDSVLSDEKPLTSVHFPLSGFNSIGHMDTMLRRRHHIGHHKEGEEFVQNVFHVLFLLFSGKEKCNLSICWLQYEISKVLQCLQRKKKKKLKAQGRKSKKLAKNLLKAPDNRNHLSLWKLYAYLEWLLGNIDDARKVFDTALGTAGTGGLKSPQLCSLSLLYAQLEVELLESLEGAVTSRAVHILTKLAESGPYVPYSGQVLSVNVLKARKTYEHALQDYLSKTPVSDQDQVNDANQLVNLVGCYALFQYLTVGIDAAVLIYAQTLEKIEAPGPQKCENTEESSGIQDFPTALEAVTLLHTNLLRFHMKISVYPLNPLREALTEALKRYPSNQSLWRSYIHIQRKSHSASKARRFFDGVTRSTNSLEPWLFAIQAEQMRKKLIENVQRADVGEIHSTIPETGLTNRIIALFEHATQSENGTHCPLLWRMYLNFLASLGKTEKSKGLFYKALQNCPWAKVLYMDAVEYFPDQLQETLDLMTEKELRVRVPMEELDLLLEV"

     polyA_site      4583
                     /gene="NRDE2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

cccacccagccccgcggccggcggccgctcgcccgctgcgggagcagggcccagccgggccccccgccctcctctccccttcccctgtctcctcgccccctgagggctcgtgtcaggcaccaaaatctagctgatggtaaaattcaatccagaatcggatggtctacaaccgaggtgtcccctcagccctcctcagtggaacggctgtagcctgcaagcgagaggcagcaaaagatgtcctgatgtcaaatgtttccttcatttctcctctgtctgctctgggtttgaaggtcttgtccaccagctgataataacccaggtctgccatcttatggagcctgaatggtactaccaaataacagaatatggaactacatgttcatgttagaagaatcgattgaattttttcttttcagaattggactggcttagtaacccaagcttctctacggaagatgcactattactgcatcagcgcactacagaagttgcaaatctcatcccggaaaaatcaccactaataaggactacttcaagatcagagttgtcaggggaaagtgatacagatgagagtctgaaacagtcaagtaagaaaaggaaaaagaaaaagaaaaaacatcaccactataagaagacaaaaaagaaaaccaaaggggactccagtagcagtgaatcggacctggacactaagaacatcaaggacaaagccacaggaagtggcagaaatcacgaaaaggaagcagcagcaaatctagataagaaaacatcaaatcttgccagccatcgctttgtttggcttgatgatatccaggctttcacagcagaaacctacagaatagacaagaaaccagaccctgcaaactggacctacaaatctctgtatcgaggggacatagcaagatataagaggagaggagagtcctgtcttggaatagatgcaaagaaacagtgtataacttgggacacttctgcatcaaaaaagaagcaattacagaggcgacctgagcgctacttcacaaagaacaatgtgaagatgctgaacacagatgggattcctgtttgcaataaaagttctccgtctgactcaactgcttttataccagttttccaaatggaaactgatgatttttctgacacaacggaggtaaatcctcttgggatttatgatccatcaactacagggtggctacaaggaaaagagtgcaagggtgcagaacatgagcccgtaaatacgcagcaaacaatgcaaaagcctgggataaacattaactccattctaatgacaaaagtggaagaacataacaagaaagttagagaaaacccaagagatattaatgcatggatggaatttgtttcttttcaggatgaattaatgagaggacctagcccttacgccagtaagggagagcaagaagtaagaagaaaatcactgaagttaatattagaaaagaaactggctattttagagagggcaattgaaagcaatccaagtaatgttgatctgaaactcgccaggttgaagctttgcacagaattctgggaaccaccagctttgatcaaagaatggcagaagctaattttcttacatcccaataatccagaactgtggaagaaatatctcctgttctgtcaaagtcagtttactacgttttctgtttcaaaaatcaatagcctctatggaaaatgtttgactacgttggcagctgtacaggacggcagcatggtatcacatcctctcctgcctggtacagaagaagctatgctagctatatttgttcagcaatgccactttctgagacaggctggccattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttcttcaaacctgacagtgtaaaagatctgccaacaaggggacaggtggaattctttgaacccttttgggatagtggagaaccacgaattggagaaaaaggagcaagaggctggaaagcctggatgcaccaacaagaaaagggtggctggattgctcttaagcctgatgatgacgatgatgaagaggagatagatgaggatcaagaaataaaggataaaactctccccaagtggcatatttggttggatattgaatattctcgtgaagcaaggcattggttaccttggaggccagacaaaaccaaaaaggaaactgaagaagattgtgatgatccagaaagacaggtattatttgatgatcttggaccatctttaatccgtctttctaatccagatcttcaacgtcaactactctactcatttttgcagttcctgggggttccatgtacaagcaaactctttccttccaacctctatattgccatggatgaaaataacatctttgacagtgtgctttctgatgaaaagccactgacttctgttcattttccactttctggattcaacagtattggtcatatggacacgatgctgcgacggagacatcacataggccaccataaagaaggagaggagttcgtgcagaatgtttttcatgttctgttcctgctgttttcaggaaaggagaaatgtaacctgtccatttgttggttacagtatgaaatatctaaggtacttcagtgtctccaaagaaaaaagaagaagaagctgaaagcgcaagggaggaagagtaaaaagttggccaagaatctccttaaagcacctgacaaccgaaaccacctttctctctggaaactgtatgcctacttagaatggctgcttggtaacatcgatgatgccaggaaggtatttgacacagctctcggcacggcagggacaggaggactgaagagtccccagctctgcagcctcagtctgctttatgctcagctggaagtggaactactggaaagtctagaaggagcagttacgtcgcgtgctgttcatatattgaccaaattggctgaaagtggaccatatgtgccgtatagtggacaagtgttatctgtgaatgtcttgaaagctcgtaaaacgtatgagcatgcactgcaagattatttaagtaaaacaccagtttctgatcaggatcaggtcaatgatgctaatcagctggttaacttggttggttgttatgcactgttccagtatttgactgttgggattgatgctgcagtattaatatatgcgcaaactttggaaaaaattgaagctcctggtccacagaaatgtgaaaatactgaagagagttctggcattcaagattttcccactgctcttgaagctgtcacactgctgcatacaaatttactcagattccacatgaaaattagcgtttatcctttgaatcctctgcgagaggcactaacggaggctctgaaacggtatcctagcaaccagtctctttggaggtcatatatccacatccaaaggaagtctcacagtgctagcaaagcacgaagattttttgatggtgtcacaaggtctactaactctttagagccatggctgtttgcaatccaagcagagcagatgaggaaaaaactcattgagaatgtccagagggcagatgttggtgaaatacattctactattcctgaaactgggttaacaaatcggattatagctctatttgaacacgcaactcaaagtgaaaatggcacccattgtccactgctgtggagaatgtatttgaactttttggcttcactaggaaaaacagaaaaaagtaaaggattgttttataaagcgcttcaaaactgtccttgggcaaaggtactctatatggatgcggtagagtacttccctgatcaactgcaagagacgctcgatctaatgactgaaaaagaattgcgagtgcgggtacctatggaagagctggatctactattagaggtttaaaagaagactgtagacgagtggagaaagtacagaagctagttcaaaacctgtcagttagacctgtctctcttcaaacaggaactctgttgggtactgtgtacttttttcttttttaaggttgagtggtttgttttggttttttttaaggttttatataaatcgctatcaaaatggagttctactaggtgtagctattctggaatcaagtactgcgttttgcccacaaaaacgaatccatttccctgaagtgttgctggctcccacagaaggataccctcttataaatagcctcctgttgaatgctgcccacatttcttattctattgtttgaaattacattccctagagttcagtagagattcagtacatgccaactatggtttggtgagcagcacaggaaataaacatctgccaaatggatgcttcactgttctccagttggcggacttcagtaattctctgcagcttggtatgcatgcgtgtgtgtatttaactaccaagtcaaacagtcattacatctgtacataaactcttagtagaagctaaatctttgcttgagcaggcacctattttggacttgtatttgtatgttttgacagatgactgttttaatacgaatatttatggaaaatatatctgaatatttgaaaagtcaaaaggaacgaattatttttttatttcttaatttaatagaactgtgagtgtattaaaaatgaagttgtatccataa

//