2025-09-14 19:22:41, GGRNA.v2 : RefSeq release 231 (Jul, 2025)
LOCUS XM_072929438 4463 bp mRNA linear VRT 07-APR-2025 DEFINITION PREDICTED: Taeniopygia guttata ATPase copper transporting beta (ATP7B), transcript variant X6, mRNA. ACCESSION XM_072929438 VERSION XM_072929438.1 DBLINK BioProject: PRJNA1244912 KEYWORDS RefSeq. SOURCE Taeniopygia guttata (zebra finch) ORGANISM Taeniopygia guttata Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133024) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_048771995.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/02/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4463 /organism="Taeniopygia guttata" /mol_type="mRNA" /db_xref="taxon:59729" /chromosome="1" gene 1..4463 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:100219575" CDS 320..4321 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X3" /protein_id="XP_072785539.1" /db_xref="GeneID:100219575" /translation="
MERKLDNKMKRELSCLATLNDRNISLVSIRKQQAACDVPELLIIGEKSKMASPVKASSNLQKEEKVLRSYSTGMTEVNTDERQALSNVDSPPGCDLKPTMKHKFAFDNMGYEESSENMSSPPSQEHTVVVNIVGMTCQSCVQSIEGRICKVKGILRIKVSLEQNNAVIKYLQLEISPEQICQEILDMGFDANIAEEKLTTATVNLPSLKEAVAKLRVEGMTCQSCVTNIEGKIRKLHGVAKIKVSLDNQEAIIAYHPYIIQPDDLKRHISDLGYDCTIKSKSAPLKLGALDLQRLQNANPRETSASLESDGLDLLVPEMGSTATVTAQIEGMHCKSCVRNIEGNISDLPGIKCIKVSLENKCAVVQYSPDLITLSALQQAIESLPPGNFKVSLLSGSEANKAASRSGAFTYNVIRQPPQGTTHTAVIKIDGMTCNSCVKSIEGAISQRQGVQHVAVSLAGSTGTIHYDPAVTSGEELRAAIEDMGFDASVLTDTATGEKRCQPDTSKAAVQPQAPEPPRQGNASDALPDSPHPEGSNQLSGAREEKCVLQITGMTCASCVSTIERNLQKEDGIVSVLVALMAGKAEIKYKPELIQPLEIAQLIQNLGFEATIMENNAETEGQVELLITGMTCASCVHNIESKLMRTNGIFSASVALATSKAHIQFDPEIIGPRDIIKVIKEIGFHASVAKRAPNAHNLSHKKEIQQWRKSFLFSLVFGIPVVVLMIYMQIPSGEDHGSKVLEQNLIPGLSILNLLFFILCTFVQFLGGWYFYVQAYKSLRHKTANMDVLIVLATTIAYLYSCIILIVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKGKTSEALAKLMSLQATEATVVTLGPGHSIVREEQVPVELVQRGDIIKVVPGGKFPVDGKVIEGNSMADESLITGEPMPVIKKPGSTVIAGSINAHGSLLVNATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTVTLIVWITIGFVNFDIIKKYFPNQSKNISKAEIILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHQIKTVMFDKTGTITYGVPKVMRVLLMGDTAVLPLKKVLAVVGTAEASSEHPLGMAVTKYCKEELGTERLGYCTDFQAVPGCGISCKVGGVEAILGIAEEGPNELDANRSGVSSAPLGDNRVITLLESQGPSASQKYSVLIGNREWMRRNGLNIANDVNDAMTNHEMKGQTAILVAIDGVLCGMIAIADTVKQEAALAVHTLQSMGIDVVLITGDNRKTAKAIATQVCSCLLASCFSLGWDQLQWQLLLCLSCCLHCS"
ORIGIN
ttggctgagcctgcagcaacgccgtgtgcagagatcagcagtgccggacgcagttgggaaagcacgaggatgccaattggtgggaaacatttaaactggcagggagagcaggtagctgagtgcagcaagcagcctacgtaaggatcacaggttgcatctgggatttcctgatgaatgcctaatgagcccatggattagacaggcagaactcttcaagctgctgtaaatgtagttgaaagaagcgtggcttgtaggacaccaaataactgctctcgtgaaaccttttttggcattgcagtatttaaagaccagaaaaataatggagagaaaactggacaataaaatgaaaagggaactgtcctgcttagctactttaaacgacagaaacatatccttggtgtctattcgtaagcagcaggcagcttgtgatgtgcctgaactactgattattggtgaaaagtccaagatggcatctccggtaaaagcaagcagtaacttgcagaaagaagagaaagttttgcggagttactctacgggaatgacagaagtcaatacagatgaaaggcaggctttgtccaacgtcgattctcctcctggttgtgacctgaagcctacaatgaaacataaatttgcttttgacaacatgggctatgaggagagctctgaaaacatgtcctctccaccttcccaagagcatactgtggtagtcaacattgtgggaatgacttgccaatcatgtgtgcagtcaatagaaggccgaatttgcaaggtgaagggcattttgagaattaaagtctcccttgaacagaacaatgctgttatcaagtatctgcagttggaaataagccccgaacagatttgccaggaaattctggatatgggctttgatgccaatatagcagaagagaagttgacaacagcaactgtaaatttgccaagcttgaaagaagcagtagctaagcttcgggtagaaggcatgacatgccagtcctgtgtcaccaacattgaaggaaagataaggaaactgcatggtgtagcaaaaatcaaggtgtcacttgataaccaagaagcaattattgcttaccatccttacatcattcagcctgatgacctcaagagacacatcagtgacctggggtatgactgcaccattaaaagtaaatcggcccctttgaagctgggtgcccttgatctccagcgcttgcagaatgcaaaccctagggagacatctgcaagccttgagagtgatgggctggatctgctggtccctgagatgggtagcacagcaacagtgactgcacagatagagggcatgcactgcaagtcctgtgtcagaaatatcgaaggaaatatatcagatcttcctggcataaaatgtattaaagtgtctttggagaataaatgtgctgtggtacagtatagcccagatttaatcaccctgtcagctctgcagcaagcaattgaatcccttccacctggaaactttaaagtaagcctccttagtggttcagaagcaaataaagcagcatctcgctcgggtgctttcacgtacaatgtcatcagacagccaccacaaggcacgacacatacggctgttattaagattgatggcatgacctgcaattcttgtgtgaagtccatagaaggggccatatcacagaggcagggagtgcagcacgtggcagtttctcttgctggcagtactgggaccatacactatgatccagctgtcactagtggagaagagttaagagctgccatagaagacatgggatttgatgcctctgtgctgacagatactgccactggagaaaagaggtgccagcctgataccagcaaagctgctgtacagcctcaagctccagagcctcctcgccaaggcaatgcctcggatgctcttccagacagtcctcaccctgaggggtcaaaccagctcagtggagccagagaagaaaagtgtgttttacagatcacaggcatgacttgtgcatcgtgtgtgtctaccattgaaagaaatttgcagaaagaagatggaattgtttcagtattggtagcactgatggcaggtaaagcagagataaaatacaagccagaactcatacaacctcttgaaatagcacagctgatccagaatttgggttttgaagctaccattatggaaaataatgcagaaacagaagggcaagtggagcttcttattacagggatgacttgtgcttcttgtgttcacaatattgaatccaaactcatgagaacaaatggcatattctctgcctcagttgcacttgcaactagcaaagctcacatccagtttgatcctgaaattattggtccacgagatattataaaagtaatcaaggaaattggctttcatgcttctgtggctaaaagagctccaaatgcacataatctgagtcataaaaaggaaatacagcagtggaggaaatctttcttattcagcctagtgtttggtatcccagttgtagtcctaatgatttatatgcaaatacccagtggtgaagaccatgggtctaaggtgctggaacagaacctcattcctggattatctattttgaatcttcttttctttatcctgtgcacttttgttcagttccttggtggatggtatttttacgtacaagcttacaagtcactgaggcacaagacagccaatatggacgtgctcatcgtgctggccacgacgattgcttatctgtattcctgcatcatcctgatagtagcaatcattgaaaaggcagagaaaagccctgtcactttcttcgacacgcctccgatgttgtttgtgttcattgcactcggcagatggctggaacacatagccaagggtaagacctctgaagctcttgctaagcttatgtctcttcaagccacagaagccactgtggtgactctcggacctggccactctattgtcagggaggagcaagtacctgttgaactggttcaaaggggtgatattataaaagttgttcctggtggaaagttcccagtggatggaaaggtcattgaaggcaattctatggcagatgagtctctcattactggggaacctatgccagtcattaaaaagcctgggagcacagtgattgctggttctataaatgcacatggctcacttcttgttaatgcaacgcatgttggtaatgataccactctggcacagattgtgaaattggtggaagaagctcaaatgtcaaaggcacccatccagcaactggcagataaatttagtggatactttgttccatttatcatcatcatttcaactgtgacattgatagtatggatcacaattggttttgtaaattttgatattattaaaaaatattttcctaatcagagcaaaaacatttcaaaagctgaaataatactgaggtttgcatttcaaacctcaatcactgtgctgagcattgcatgcccttgctctttaggcctggctacccccacagctgtaatggtgggcacaggagtggctgcgcagaatggtattctcatcaaaggtggaaaacccctggaaatggcacatcagatcaagactgtgatgtttgataaaactgggaccatcacctatggcgttcctaaagtcatgagagtgcttttgatgggagacacagctgtgctccccctgaagaaggtactggcggttgttggtacagcagaagccagcagtgagcatcctttaggaatggctgtcactaaatactgcaaagaggagcttggcactgagaggctgggatactgcactgacttccaggcagtcccaggctgtggtatcagctgcaaggtcggaggagttgaggccatccttggcatagctgaggaaggtcccaatgagctggatgctaacaggagtggggtcagcagtgctcctctgggagataacagagttatcacgctcttggaatcacaaggtccatcagcttctcagaaatattcggtgttgatcggaaatcgtgagtggatgcgacgcaatggcttgaatattgcaaatgatgtaaatgatgcaatgacaaaccatgaaatgaaaggacagactgccatactagtggctatagatggtgtgttgtgtggaatgatcgcaatagcagacacagtcaagcaggaggcagcccttgctgtgcacacactgcagagcatgggaatagatgtggtgctcataacaggggacaataggaaaactgcaaaagccattgctactcaggtgtgttcatgcctgttggcctcgtgcttcagccttggatgggatcagctgcaatggcagcttcttctgtgtctgtcctgctgtcttcactgcagctgaaatgttacaagaagccagacacagaaagttacgaagcacaagcccaaggccgcatgaagccactcactccttctcaaatcagtgttcacattggaatggatgataggaggagggattcttccaaaccatctccttgggatca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]