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2025-09-14 19:27:15, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       XM_072850278            6373 bp    mRNA    linear   VRT 03-APR-2025
DEFINITION  PREDICTED: Ciconia boyciana ATPase copper transporting beta
            (ATP7B), transcript variant X2, mRNA.
ACCESSION   XM_072850278
VERSION     XM_072850278.1
DBLINK      BioProject: PRJNA1244888
KEYWORDS    RefSeq.
SOURCE      Ciconia boyciana (Oriental stork)
  ORGANISM  Ciconia boyciana
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes;
            Ciconiiformes; Ciconiidae; Ciconia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_132934) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_034638445.1-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/02/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6373
                     /organism="Ciconia boyciana"
                     /mol_type="mRNA"
                     /db_xref="taxon:52775"
                     /chromosome="1"
     gene            1..6373
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:140646404"
     CDS             160..4458
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2 isoform X2"
                     /protein_id="XP_072706379.1"
                     /db_xref="GeneID:140646404"
                     /translation="
MKHNFAFDNMGYEESFETAPSPSSQEHTLAVNVVGMTCQSCVQSIEGRISKVKGIVSIKVSLEKNNAVIKYLQSDISPEQICQEIQDMGFDANVTEERLTTATINLSCLREAVVKLQVEGMTCQSCVTNIEGKIRKLHGVAKIKVSLGNQEAIIAYYPYIIQPDDLKSHISNLGYECTIKSKAAPLKLGVLDLRHMQNANPKETPASLKSDGMDPPVAKMSGTATVAVRIEGMHCKSCVRNIEGNISDLPGIQSIKVSLEHKRAVVQYSPNLITLSALQQAIESLPPGNFKVCLPNGSEVNKGASPSPALLCDLFREPLQDTTRTAVIRIDGMTCNSCVQSIEGTVSQRQGVQCIAVSLADRTGTIHYDPAVTNGEELRAAIEDMGFDASVLTDTTAGERGHRPDTSNAAVQPQVPEPPHQGCASDAFPDSPHLDGPNQPSGVTAEKCFLQITGMTCASCVSTIERNLQKEDGIVSVLVALMAGKAEIKYKPEFIQPLEIAQLIQNLGFEATVIEDHAEIEGNVELLITGMTCASCVHNIESKLMRTNGIFYASVALATCKAHIQFDPEITGPRDIIKIIEEIGFHASVARRVPNAHNLDHKKEIQQWRKSFLCSLLFGIPVLILMIYMLIPDGEHHGSMVLEQNLIPGLSVLNLLFFVLCTFVQFLGGWYFYVQAYKSLKHKTANMDVLIVLATTIAYVYSCVILMVAIIEKAEKSPVTFFDTPPMLFVFIALGRWLEHIAKSKTSEALAKLISLQATEATVVTLGPDHSIVREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTVTLIVWITIGFINFDVIQKYFPNQNKHVSKAELILRFAFQTSITVLSIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRVLLLGDTAVLSLKKVLAVVGTAEASSEHPLGVAVTKYCKEELGTQSLGYCTDFQAVPGCGISCKVRGIEAILGTDEEGLDNLDTNRNRDSSAPLGDDNMLITLSESHGPSASHTYSVLIGNREWMRRNGLHIANDINDAMTDHETKGQTAILVAIDGVLCGMIAIADTVKQEAALAVHTLKNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQNGRRKVAMVGDGVNDSPALARADIGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLILALIYNLLGIPIAAGVFMPVGLVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDTESYEAQAQGRMKPLTPSQISVHIGMDDRRRDSSRPAPWDQISQVSLSSLTSDKLPRRNAFVEEEGDKWSLLMNGGDEEQYI"
ORIGIN      
aaaggcaagagggtgacagctagtttcagcctgtggaggtacagggagaagagcagcccaaaacctctgaagatactgggcgagaggttcagtgagatccggcattcgtgggctttgtccaacactgattctcctcctgactgtgagctggagcctacaatgaaacacaattttgcttttgacaacatgggttacgaggagagctttgaaactgcgccctctccatcttcccaagaacacactttggcagtcaatgttgtgggaatgacttgccaatcttgtgtgcagtcaatagaaggccgaatttccaaggtgaagggcattgtgagtattaaagtctcccttgagaagaacaatgctgtaataaagtatctgcagtcggatataagtcctgaacagatttgccaggaaattcaggatatgggctttgacgccaacgtaacagaagagaggttgacgacagcgaccataaatttgtcgtgcttgagagaagcagtagttaagcttcaggtagaaggcatgacatgccagtcctgtgtcaccaacattgaaggaaagattaggaaactgcatggtgtggcgaaaatcaaggtgtcacttggtaaccaggaagcaattattgcctactatccctacatcattcagcctgatgaccttaagagccatatcagtaacctgggatatgaatgcaccattaaaagtaaagcagcccctttgaagcttggtgtcctcgatctcaggcacatgcagaatgcaaaccccaaggagacaccagcaagtctcaagagtgatgggatggatccaccggtcgccaagatgagtggcacagctacagtggctgtacggatagaaggcatgcactgcaaatcctgtgtcagaaacattgaaggaaatatatcagatcttcctggcatacaaagtattaaagtgtctttggagcataaacgtgctgtggtacagtatagcccaaatttaattaccctgtcagctttgcagcaagctattgaatcccttccacctggaaactttaaagtatgtctccctaatggttcggaagttaataagggagcatctccttcacctgctttgctatgtgatctcttcagagagccgctgcaagacacgacacgcacagctgttattaggattgatggcatgacctgcaattcctgtgtacagtccatagaagggaccgtatcacagaggcaaggagtgcaatgtatagcagtttctctagctgacagaactgggaccatacattatgatccagctgtcactaatggagaagagttaagagctgccatagaagacatggggtttgatgcttctgtgctgacagataccaccgctggagaacgtgggcaccgacctgacaccagcaatgctgccgtgcagcctcaagttccagagcctcctcaccaaggctgtgcttcggatgcttttccagacagtcctcaccttgatggaccaaaccagcccagcggagtgacagctgaaaagtgttttttacaaatcacaggcatgacctgtgcatcgtgtgtgtctaccattgaaagaaatttgcagaaagaagacggaattgtttcagtgttggtagcactgatggcaggtaaagcagagataaaatacaagccagaattcatacagcctcttgaaatagcacagctgatccagaatttgggttttgaagctaccgtcatagaagatcatgcagaaatagaaggaaatgtggagcttcttattacagggatgacttgtgcttcttgtgttcacaatattgaatccaaactcatgagaacaaatggcatattctacgcctcagttgcacttgctacttgcaaagctcacatccagtttgatcctgaaattactggacctcgagatattataaaaataattgaggaaattggctttcatgcttctgtggctagaagagttccaaatgcacataacctagatcataaaaaggaaatacagcagtggaggaagtctttcttgtgcagcctactgtttggtatccctgtcttaatcctaatgatttatatgctaatacccgacggcgagcaccatgggtctatggtgctggaacagaatctcattcctggattatctgttttaaatcttctcttctttgtcctgtgcacttttgttcagtttcttggtggatggtatttttacgtacaagcttacaaatcactgaagcacaagacagccaatatggatgtgctcattgtattggccacgacgattgcttatgtgtattcgtgtgtgatcctaatggtagcgataattgaaaaggcagagaaaagccctgtcactttctttgacactcctccgatgctgttcgtgttcattgcccttgggagatggctggaacacatagcaaagagtaagacctcagaagctcttgctaaacttatatctcttcaagccacagaagccactgtggtgactcttggacctgaccactctatcgtcagggaggagcaggtagctgttgaactggttcaaaggggtgatattgtaaaggttgttcctggtggaaagttcccggtggatggaaaggtcattgaaggcagttctatggcagatgagtctctcattactggggaagctatgccagtcactaaaaagcctgggagcacagtgattgctggttctataaacgcacatggctcagttcttgttaatgcaactcatgttggtaatgataccactctggcacaaatcgtgaaattggtggaagaagctcaaatgtcaaaggcacccatccagcaactggcagataagtttagtggatattttgttccatttatcatcatcatttcaacagtgacattgatagtatggatcacaattggttttataaattttgatgttattcaaaaatattttcctaatcagaacaaacacgtttcaaaagctgaactaatactgaggtttgcatttcaaacctcaatcactgtgctgagcattgcatgcccctgttctttaggcttggctacccccacagctgtgatggtgggcacaggagttgctgcgcagaatggtattctcatcaaaggtggaaaacctctggaaatggcacacaagatcaagactgtgatgtttgataaaactgggaccatcacctgtggagttcctaaagtcatgagggtgcttttgctgggagacacggctgtgctctctctgaagaaggtactggcggtggttggcactgcagaagccagcagcgaacatcctttaggagtggcagtcactaaatattgcaaagaggagcttggcactcagagcctaggatactgcaccgacttccaggcagtcccgggctgtggcatcagctgcaaagtcagaggtattgaggccatcctgggcacggacgaggagggtcttgataatctggacactaacaggaacagggacagcagcgctcctctgggagatgataacatgctgatcaccctctccgaatcacatggtccatcagcttctcatacatactcggtgttgattggaaatcgtgagtggatgcgacgcaatggcttgcatattgcaaatgacataaatgatgcaatgacagaccatgaaacaaaaggacagactgccatactagtggctatagatggcgtgttgtgtggaatgattgcaatagcagacactgtcaagcaggaggcagcccttgctgtgcacacgctgaaaaacatgggaatagatgtggtgctgataacgggggacaacagaaaaactgcaaaagccattgctactcaggttgggatcaaaaaagtctttgctgaggttcttccttctcacaaggttgcaaaggtccaggagctccaaaatgggaggaggaaggttgcgatggttggtgatggagtcaatgattcccctgcgctagccagggccgacatcggaattgcaattggaacgggcaccgatgttgccattgaagcagcagatgttgttctcatccgaaacgacttgctggatgtagttgccagtattcacttatcaaagagaacagttcgaagaatacgaataaatctgattcttgccttaatttataatctgcttggaatacccatagcagcaggtgtgttcatgcctgttggcctcgtgcttcagccttggatgggatcagctgcaatggcagcttcttctgtgtctgttgtgctgtcttccctgcagctgaaatgttataagaagccagacactgaaagttatgaagcacaagctcaaggccgcatgaagccacttactccttcccaaatcagtgttcatattggaatggatgataggaggagggattcatccagaccggctccttgggatcagattagccaagtgtctctctcttccttgacttcagacaagctgccgagacgtaatgcttttgttgaggaggaaggggacaagtggtcattgcttatgaatggaggagatgaagaacagtatatctgaagcactgtattcttagtacaggaggaaatgttcctcctcatcagtgacaggagtgaccaatttatgtcatcaagagcttcaaggttgtagcgaagtcattccttcagctcacaaaatgattgcaactcagctcaatgttgggctgtatggatggtggatttttttcaggtcaccagttacttctagtcatggaaagaatctgtggctctctaatgaactggctcctttgcacacagcaattagtgaaataatgtagaattgtaattttcagagtctaaaagagcttctctcttctagactgtttgctgggcaccaaatttcatacttttagctctttctaactttattctttgaagagcacatgaagcaaaaatatgttcagagctgccaaatattaatttctgtgtccaagtgaaaatagccatggcataaggagctctgtggttggaagttgtatttttacacagaatcctaactagtcatgtcactgtgagagcactttgtatttaggattcatatgtgtctccttggaccaaaaatgctttggtgtttcactgactagaactctctgaaaggtctctcaaagattttcacttgctttcaggtattgcatccttttgatgcacatttccattgctaaacttgttctgtcattcacactgctctcctagattttctcttttgctccgtatgagctcttttttcccttttctttgcacaagatatcttctatgagttattgttatgtttacagatattcctgtttgggacaaactcctttaagtcaccaggaacttttccattcctattgaagtcctcaaaggcagagcaattcctggtccaagttagcatatcattttcctgtggataccttgcaggaccccgtgaagctcctgacaactgggtagttgtctgtctcgtccctctgacagagtgaagaatttatgccagtgtgagtgaaggtggtatttacatggtgtgactgagagcagaactagcactgctgtgactccagcatggctgaaagaagtgagtttattgcataagttaaccccagcttgcttaaaatggagccaaaagtttaaatggtaaaggtggaaaaatggccttaaaatgtggggcttctatttgctatcatataaataaccttttctgatgacagaaggacttgaactaagatttgtaatggcttgaattttaatgtaaatttgtgttcatgttttgaataggttttaatttccctctttgctctagtttcatgagaaatcaaggtgctgaacaaccctttttttcacttttaacgtctttaccaaagcttgcagtaactttatcactgtgaatgtcaaattcatcccttaacacttttcagtcaggacagtaggaatcaatggctttggtgcactgaatccggtcctggggtgctgcgttgctcagctgtgggactctgaagcaagcagactggagttttatagtcaaatctaaaaagtgaaagaccaggaattactgtgctaagcaatgtgaaataaccactgaacttcactgacttaaatacagaattgtttccaatacaggttcaaaccctgctcctcctaatgtaaaaatgaaaaacaagtcagagaggaaaagaactgtgcttaaagcattgagcaggtcttcctattctctcttcctcttaatattatatttcagctttccttatcaaacatcgacagcactgtcttaaatataattacaaatcagttttaaaactgtaaaaatctctttacatgtgtagagattactttcacagcacacacactttttaaacatgccgtaggttcctatacatgtccctgtggggaagatggtctactgttttatgttttcttaccagtgcttacagtaaaaatattgtgttttttaaaacaagcaaaca
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]