LOCUS       XM_071735134            2058 bp    mRNA    linear   VRT 03-MAR-2025
DEFINITION  PREDICTED: Heliangelus exortis vimentin (VIM), mRNA.
ACCESSION   XM_071735134
VERSION     XM_071735134.1
DBLINK      BioProject: PRJNA1226279
KEYWORDS    RefSeq.
SOURCE      Heliangelus exortis
  ORGANISM  Heliangelus exortis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes;
            Trochilidae; Heliangelus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092423) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036169615.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/24/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Heliangelus exortis"
                     /mol_type="mRNA"
                     /db_xref="taxon:472823"
                     /chromosome="2"
     gene            1..2058
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 171 ESTs, 41 long
                     SRA reads, 2 Proteins"
                     /db_xref="GeneID:139792178"
     CDS             79..1458
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_071591235.1"
                     /db_xref="GeneID:139792178"
                     /translation="

MSISTKNSSYRRMFGGSSRPSTGTRYITSSSRYSLGSSLRPSSARYVSASPGGMYATKTTSMRLRSSMPPMRLHDSLDFSLADAINTEFKANRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLADDIMRLREKLQEEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHDEEIRELQAQLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMHEMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRINMPIPTFASLNLRETNIESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"

     misc_feature    100..360
                     /gene="VIM"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:461414"
     misc_feature    361..1287
                     /gene="VIM"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
     polyA_site      2058
                     /gene="VIM"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ggggccaacgcctttcttcgcccgccgcgcgcccgactcgcccctctcccggattacaaagcccgtaccgccgcagccatgagcatcagcaccaagaactcttcgtaccgccgcatgttcggcgggagcagccgccccagcaccggcacccgctacatcacctccagcagccgctactctctgggcagctccctgcggcccagcagcgcccggtacgtgtccgcctcgcccggcggcatgtacgccaccaagacgacgtcgatgcggctgcggagcagcatgccgcccatgcggctccacgactccttggacttctccctggccgacgccatcaacacggagttcaaggcgaaccggaccaacgagaaggtggagctgcaggagctcaacgaccgctttgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctggagcagcttaagggcaagggcacgtcccgcctgggcgacctctacgaggaggagatgcgggagctgcgccggcaggtggaccagctcaccaacgacaaggcacgcgtggaggtggagcgggacaacctcgccgacgacatcatgcggctgagggaaaagttgcaagaggagatgctgcagcgggaggaagctgagaacaccctgcagtccttcagacaggatgttgacaatgcctctctggcacgtcttgatcttgagcgcaaagttgagtccctgcaagaggagattgtcttcttgaagaagcttcatgatgaggaaatccgagaactgcaggcccaactccaggaacagcacatccaaattgatatggatgtttctaagcctgatctcactgctgccctgcgggatgttcgccaacagtatgaaagcgttgctgctaagaatcttcaggaagctgaagagtggtacaagtccaaatttgcagatctttctgaagctgctaataggaacaacgatgccctgcgccaggccaagcaagaagcgaatgaataccgcagacagattcagtctctcacctgtgaagttgatgcccttaagggaagtaatgaatccctggagcgtcaaatgcatgaaatggaggagaattttgctgttgaagctgctaactaccaagacactattggccgtctgcaggatgagattcagaacatgaaggaagaaatggctcgccatctccgcgagtaccaggacctgctgaatgtaaagatggctcttgatattgagattgccacctacagaaaactgctggagggcgaagaaagcaggattaacatgcctattccaacctttgcctctttgaacctgagagaaaccaacattgagtctcagccaatggttgacactcattcaaagaggacacttctaattaagactgtcgaaactagagatggacaggttattaatgaaacttcccagcaccatgatgacttggagtaaagctgaagtgaaaatgcatacttactaatgaaggagaaattcttaccagcaagatttaaaaagtccatgtcttaaaggaagaaacagctttcaagtgcctttctgcagtttttccatgagcgcaagattattatgctaggaaataggtcttagatcttgcaaactgactctccctgaaggattagagtttacaatggagtctagtttacaaatagcaatatcttgtgctgcaatactgtttttaagtatctgaattcaataaaactgctttttccagcacagtatgagcaacctgtcgctacttcaataaatctttggaaaatggctcttgatgtgttctaatttgttaactttgactttctggaaagccataacaacataatgctggaattactatacggttgacatttccagtactggttgtgtggaatgctgttttttcaatttaattagataaactgtcttactcatttactgcttaggttttggaaccaagtaaaatggactataactggcaaatgtgtaatgtattatgatatttcttaccacttgaataaaatatgatacttcaagctaataaaaattaatcttgcttccata

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