2025-07-10 00:52:01, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_071351106 4135 bp mRNA linear VRT 18-FEB-2025 DEFINITION PREDICTED: Salvelinus alpinus golgin subfamily A member 6-like protein 7 (LOC139544223), transcript variant X1, mRNA. ACCESSION XM_071351106 VERSION XM_071351106.1 DBLINK BioProject: PRJNA1211668 KEYWORDS RefSeq. SOURCE Salvelinus alpinus (Arctic char) ORGANISM Salvelinus alpinus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_092103) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_045679555.1-RS_2025_01 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 01/27/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4135 /organism="Salvelinus alpinus" /mol_type="mRNA" /db_xref="taxon:8036" /chromosome="18" gene 1..4135 /gene="LOC139544223" /note="golgin subfamily A member 6-like protein 7; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:139544223" CDS 3365..3865 /gene="LOC139544223" /codon_start=1 /product="golgin subfamily A member 6-like protein 7" /protein_id="XP_071207207.1" /db_xref="GeneID:139544223" /translation="
MGVLKGRFHILHEPLRLCFLKTLRDEVDKREETLRDEVDKREETLRDEVDKREETLWDEVDKREETLRDEVDKREETLRDEVDKREETLRDEVDKREETLRDEVDKRKETLRDEVDKREETLRDEVDKREETLRDEVDKREETLWDEVDKREETLRDEVDKREETK"
polyA_site 4135 /gene="LOC139544223" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
atttcgaagttcttccaaacttcacattttaaagtgtttaaggttaagtgtaggtattaactctgcatttttaaggttagtgttaagtttaggcattcactccgaatggttaaggtttgggataggcttaaaataaaaatgtctatcgctaaaaactttttatcgctggattcaccagatgcaccagaggcagatgcttacacccatacgccatccctgtccctaacgccctagcaaaacttaaacttacttgaaggtaaccgtgctcactgttgcccctagtggcaggtgtccacgtcatctcccgacgtcctctgacatggatggacatcgaatactgacttgtatcaggggtgacctggctggacaaaacaacgcaaggtgcaagcaaacggtgaagacagataatgttgaagcattaacagataagtaaaaagcattggcgtatgcatattaacccatcattcattagctaaatatttagcttaatactgcagtgaaaatacacagtgaatttacacagtgaaataaaaagttatcagattatgaaatgacaggtaggtttaatgtaaagcctataggcctatcaatatgtgcgatccgcaagctgcactcccagtcccgaggaataaaggaccaattgattacgtttttttatagggaaaagaaaactatcccacattggctacaaaaacacaatgcaacgagtcattttattgttgttttcaagtgagttcaaaactcaaatctaggctgtaaagcacagtgaatatatcatttatgataccaatggaaaatgtgggcttcttctgatactgagatgtgctgtctgtcatggaatatcaacaggggctggaaccggttcagggaaaaaatgaggaactgaatcaaaaccgagaacaaaagtgatctatactgctccagacagaactgttattttaaaagcagtttaattttacattcagggcatttttgggggggtcccacaaaaaactcaacaaagcacctatgcaaatccctcactctgtcactcagaaatgtattacagtgtctgcctgcctgcctgcctgccgaaagtctttgtcagtgtgtatgcgggtgtgtaggcaacctaacccctccgaagcatattcagtttcgatgtcacatcataaattagaacatgcaaagccacgggtggcaagtagcttaggtgttaagagaattggtccagtaactgaaaggtcgctggttcaaatcccaaggtgaaaagatctgctgttcttcccttgagcaaggcagtttaccactgttagcagttgatgttattctttaataacacagaccccaaggcaaatcagggggaggaaaataggtttattcacagatgataaatcatagatgttatgctgagaggtagatggtagatgttcatggtcctcagtgattctctctacagaacaaagggacagcatgtaattttataaccctatttggctaatggccaaatagcaagtatcctatttcagactcaatatatagacaaatccctcccatgtctctgcattaatcccctggtttcaagagaaattgatatttcacatagatttctctacgtaagcatgtcctgattttcaggaaaaagtttgggcatttcaactagatatccctaatatgatgactgctgtgtacaacagaagattatcaggttctgataatcttacaatgcttcttcacccgagattggcccccaattactaatcaaccactttattctccaggctccactttgtcatcgaactggacaaccttgcaatgagtgacatgtatccatcgtgattttccctggacttttactgctgacctcgttatgagcaaaacttgataaggaccttcccattttggccctaatgagtctgttacatatttttttaccatcatccactgtcctggtacaacgtcatgtccccccctcggaagatattccccacgcctcttttacttgtctgtctgcttccccaaatggccaaataacaagcatcctatttcagactcaatatatagacaaattcctcccatgtctctgcattaatccccattacagaaaaaacacaatttccaatgaccgttagtactcaattgacctttagcactcttgacctctcgtactctgcattgtgtatttatcttcgacatattcttacacccccaacaacaactgctccacgggcgccgatgacgttgattaaggaacaccccccaatatgctttgctttcagtcaactatagctagaagtaatgttgcctgttgcttgggagacctgtacaggttgtaagcaaattggatagattgcagctaacgttagctatctcaagtccgaccaatagtgtatatatatatatcattgagtcagacattgtaatcggctataattgagaaggttggagtgaaagccatcctgaaagtacatcagctagcaaacgctacctgtcttagagatagtgaaatgtgttgtgttggcctgttgtgcacacagggtaaagagccgcccatgaattgagtcagaagccgagctcccccaccttagctctaaattagtgagagtttgcggtgtaattatttgacctattaattctcaatgggctttggtcaaacgcacaacgtagaaatgaaatggcatttcagataaacacattatcttttgttgttctttcttctaatgggagttaggaggtagaaacagtaaaactgtgtgatgtgacgattgcacgatccttatctctgcacatgtacctgctgttcaagggtccgtttccacccctacctcttacttccacttctaacattgtctatgattattcatttttgaggacacaactgtactcaaactacaagaaatggacaactgttaagtatttcatagcttgtagtcctgctggcaatatcacatgcctatttaacgtcaaaaggctggggtgctcgtgcatctgatgtgaagattgtcagagagtctggctgtatctctcctcctcatcctggtgaccaggtatgtataatataggcctgggtgcctggactctttaagctgatctgtcaaatcttgtttcttttcccagaggagttggcaaaacagctccaagaaatctggcacccagactgtatttcattcaggaaaagaagacatgtaatttctgatcttggctgattgtttttttttgtgatttcagatctcggctgaccaaggttttaccctcagagacgactttgctctaattggagtccatttcctcaccccagccttcacgtggcagaagccaactcccagtgaaagaggtggaagaatcaagagtcaaattcaatgtttggatttatactgagagggtgatgggtgtcctaaagggaagattccatatcctccatgagccacttcgactttgcttcttgaagaccctgagggatgaggttgacaagcgagaagagaccctgagggatgaggttgacaagcgagaagagaccctgagggatgaggttgacaagcgagaagagaccctgtgggatgaggttgacaagcgagaagagaccctgagggatgaggttgacaagcgagaagagaccctgagggatgaggttgacaagcgagaagagaccctgagggatgaggttgacaagcgagaagagaccctgagggatgaggttgacaagcgaaaagagaccctgagggatgaggttgacaagcgagaagagaccctgagggatgaggttgacaagcgagaagagaccctgagggatgaggttgacaagcgagaagagaccctgtgggatgaggttgacaagcgagaagaaaccctgagggatgaggttgacaagcgagaagagacaaaatagtacacgtatgtgctgctttggtgaacatgtctgatagtgttgtttacaagaagacaactaaatgaatgtgactgccaaagtgatgccaaagtgatgtcaaagtaatcctgaaatggcaatcttatttttcaccagcccatatttttggagtaatttgaatcagttaattttctaaaaactgttttatctgtttaacctacatgactgccgtcatttctttgaatcagttcattataatactgtttgatatgattaaattattacattttg
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]