LOCUS       XM_070963231            1746 bp    mRNA    linear   VRT 24-JAN-2025
DEFINITION  PREDICTED: Chaetodon trifascialis vimentin-related 2 (vimr2), mRNA.
ACCESSION   XM_070963231
VERSION     XM_070963231.1
DBLINK      BioProject: PRJNA1210627
KEYWORDS    RefSeq.
SOURCE      Chaetodon trifascialis (chevron butterflyfish)
  ORGANISM  Chaetodon trifascialis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae;
            Chaetodon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092060) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_039877785.1-RS_2025_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/22/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Chaetodon trifascialis"
                     /mol_type="mRNA"
                     /isolate="fChaTrf1"
                     /db_xref="taxon:109706"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="heart, liver"
                     /dev_stage="adult"
                     /geo_loc_name="Saudi Arabia: Red Sea"
                     /lat_lon="22.307781 N 38.967423 E"
                     /collection_date="2019-07-20"
                     /collected_by="Jessica Nowicki"
     gene            1..1746
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:139331635"
     CDS             1..1185
                     /gene="vimr2"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_070819332.1"
                     /db_xref="GeneID:139331635"
                     /translation="

MAMLRVSSYRKLFEDDSWSRNGGLSMQCAGQYRASVRGAAADECDCDKLDFEAAKALNKEGLNRFVQDRAIIAALNDRLVRLIELAHCFEEENESLECQIAEIKDELSGRQAPSSITSTVAEPDYSLDAVVDRLRRERDEILRDTEGLQRELGRLMDECEKAAQQRILLQQERQDVAEEVDAVTAGCLALREQVAIYEEQLTNMEAQHKTAVEGLLEPDEGTNGGVAAIRFGIPDITPVLDVKEYYRQLAESLQYECGAASSAVVHSADGKQLEVGRAAGSTVKDLSEMKDVSEMKMLISELQKELAELEKCYEELEDEAEMKKAAYMAEIAELECTIDEMRHQEADFQTQMKEQCEDYRELLSEKMARDMEITAYRSLVEEEEERLCNLCLEA"

     misc_feature    199..1158
                     /gene="vimr2"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
ORIGIN      

atggccatgctcagagtgtcttcttaccgcaagctgtttgaggatgatagctggagtcgaaacggagggttgagtatgcagtgtgcagggcagtaccgggcctccgtcagaggtgcagccgctgacgagtgtgactgtgacaagttagacttcgaggctgccaaggcgctcaacaaggagggtctgaaccggtttgttcaggaccgcgccatcatcgctgccctcaatgaccgcctggtcaggcttattgaactggcccattgttttgaggaggagaacgagtctcttgaatgtcagattgctgaaataaaggacgagctgagcggtcgacaggcgccctccagcatcacctccacggtggctgagcctgactacagtctggatgcggtggtggacagactgcgcagggagagggatgagatcctgcgtgacaccgaggggttgcagagggagctcgggcgtctgatggacgaatgtgagaaggctgcacagcagaggatcctcctccagcaggagcgacaagatgttgcagaggaagtggacgctgtgacagcggggtgtttggcgttgagggagcaagtggctatctatgaggagcagctgaccaacatggaggcccagcacaagacggcggtggagggtctgctggaaccggatgaagggactaacggaggggtggcagcgattagatttggcatccctgacatcactccagtcttggatgtaaaggagtactaccgccagctggctgagagcctccagtacgagtgcggtgcagcctcttctgctgtggttcacagtgctgatggaaaacaactggaagtgggaagagctgcagggtcaacagtcaaagacttgtcagagatgaaggacgtcagtgagatgaagatgctgatttctgagctgcagaaggagcttgctgagctggagaagtgttatgaggagctggaggacgaggctgagatgaagaaggctgcatacatggctgagatcgctgagctggagtgtaccatagacgaaatgcggcaccaggaggccgacttccaaacgcagatgaaggagcagtgtgaagactacagggagctgctgagtgagaagatggccagagacatggaaatcactgcctacaggagtctggtggaggaagaggaggagaggctgtgcaacctgtgtctggaggcctgagagtcagactggttggctggagtgtggctggatgctcccccgcacatggattagaaaatagacataagagaaacgtgaaaaacacgcccagttctgcactaggacgaagcttaaggtaccactgcagcaatttaagcagatgtaaacttatcatgacagattaatgccgtctggaggcctaagccgggccattgataacaggtcgctggcagatgaccccgagactccaagaaagatggagctgtctaaaacgggtgggaggatgggggctgtgcgatgagtgtgtatccattcagtgtctggcagggatatttccttaagtgggttttatctcaaagcagctcactgatatgattcataaatgttttgtcccctctttgttgaacaagccccacacaaacacagaaacacagataccgacgcacacgagctaaactgtgcggctccgtggagtcattgcacctcgtccatcactcaaactttgtctgattaccagctcttaacctttgacctcttcggtgttggcaaccatattgacagctctcccttcagtaactggca

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