LOCUS       XM_070837215            1752 bp    mRNA    linear   VRT 11-JAN-2025
DEFINITION  PREDICTED: Pempheris klunzingeri vimentin-related 2 (vimr2), mRNA.
ACCESSION   XM_070837215
VERSION     XM_070837215.1
DBLINK      BioProject: PRJNA1208050
KEYWORDS    RefSeq.
SOURCE      Pempheris klunzingeri
  ORGANISM  Pempheris klunzingeri
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Acropomatiformes; Pempheridae;
            Pempheris.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092020) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_042242105.1-RS_2025_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/10/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Pempheris klunzingeri"
                     /mol_type="mRNA"
                     /isolate="RE-2024b"
                     /specimen_voucher="WAM P35483.003"
                     /db_xref="taxon:3127111"
                     /chromosome="9"
                     /tissue_type="Whole fish"
                     /dev_stage="adult"
                     /geo_loc_name="Australia: Western Australia, New Year
                     Island"
                     /collection_date="2023-03-28"
     gene            1..1752
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:139207486"
     CDS             1..1173
                     /gene="vimr2"
                     /codon_start=1
                     /product="low molecular weight neuronal intermediate
                     filament"
                     /protein_id="XP_070693316.1"
                     /db_xref="GeneID:139207486"
                     /translation="

MAMLRVSSYRKLFEEDTWSRNGGLSMQCAGQYRASARAATVDECDCDKLDFVAAKALNKEGLSQFVQDRTIIAALNDRLVRLIELAHCFEEENESLECQIVELEEKLNSRQASSSITPTVAEPDCSLDAVVERLRRERDEILCDTEELRKELELLMKAYEKAAQQRIVFQQERQDVAEEVDAVTVGCLALREQVAIYEEQLANMEAQHKTEVESLLEPAGRSSGAAAALRFGGPDITPALDVKEYYCQLAESLQYECGPASSAVVRSADGKQLEVRGATGSTVKDLPKVKDISEMKMLISELQKELAELEKCNEELEEEAEMKKAADMDEIAELECTIDEMQHQEADFQVQMKEQCEDYKELLSEKMARDMEIVAYRSLVEEEEVRLCNL"

     misc_feature    199..1158
                     /gene="vimr2"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
ORIGIN      

atggccatgctcagagtgtcttcttaccgcaagctctttgaggaggatacctggagtcgaaatggaggattgagtatgcagtgtgcagggcagtaccgtgcctccgccagggctgcgactgtcgatgagtgtgactgtgacaagttagactttgtagctgccaaggcactcaacaaggagggtctgagccagtttgttcaagaccgcaccatcatcgctgccctcaatgaccgcctggtccggcttattgaactggcccattgttttgaggaggaaaatgagtctcttgaatgtcagattgttgaactagaggagaagctgaacagtcgacaagcctcctccagcatcacccccactgtggccgagcctgactgtagtctggatgcagtggtggaaagactgcgcagggagagggatgagattctgtgcgacacagaggagttgcggaaagagcttgaacttctgatgaaagcgtatgagaaggctgcacagcagaggatcgtctttcagcaggagcgtcaagatgttgctgaggaagtggatgctgtgacagtggggtgtttggcgctgagggagcaagtggctatctatgaggagcagctggccaacatggaggcccagcacaagacggaggtggagagtctgctggagccagctggacgatctagcggagctgcggcggctcttagatttggaggccctgacatcactccggccttggatgtaaaggagtactactgccagctggctgagagcctccagtatgagtgtggtccagcctcttctgctgtggttcgcagcgctgatgggaaacaactggaagtgagaggagctacagggtcaacagtgaaagacttgccaaaggtgaaggacattagtgagatgaagatgctgatttcagagctacaaaaggagcttgctgagcttgagaagtgtaacgaggagctggaggaggaggcagagatgaagaaggctgcagacatggacgagattgctgagttggagtgtactatagatgaaatgcagcaccaggaggctgacttccaagtgcagatgaaggagcagtgtgaagactacaaggagctgctcagtgagaagatggccagagacatggaaatagttgcctacaggagtctggtggaggaagaggaggtgaggctgtgcaacctgtgatttgaggccggagagtcagactggctggttggagtgaggccccccacatggattagaaattagaccaaagagaaacatgaaaaacaaacccaaatcagcactaggacgaagcttatggtaccaatgcagcaatttaagcagctgtaaacttatcatgacagattaatgccgcctggaggcctaagctgggccattgataacaggtcgctggcagatgaccccgagactccaagaaagatggagctgtctaaagctggtgggaggacgagggctgtgcaatgagtgtgtccattcagtgtctggtggggatatttccttaagtgggttttatctttaccggctcactgatacgattcataaatgttttgtccccgctttgttgaacaagccacacacaaaaacacagatacacacacacacattggaagtaaactgtgtggctctgtggactcgcaccacctcgtccatcactcaaactctggtctgattaccagctcttaacccttgaccccttcactgttaccaaacgtattgacagcttcgctgactttaagcatcttacctcgctttgcttttaca

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