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2025-07-10 00:51:26, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_069283197             759 bp    mRNA    linear   INV 18-OCT-2024
DEFINITION  PREDICTED: Argopecten irradians serine-aspartate repeat-containing
            protein C-like (LOC138334543), mRNA.
ACCESSION   XM_069283197
VERSION     XM_069283197.1
DBLINK      BioProject: PRJNA1171459
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Argopecten irradians (bay scallop)
  ORGANISM  Argopecten irradians
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae;
            Argopecten.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091144) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_041381155.1-RS_2024_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/11/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..759
                     /organism="Argopecten irradians"
                     /mol_type="mRNA"
                     /isolate="NY"
                     /isolation_source="New York"
                     /db_xref="taxon:31199"
                     /chromosome="11"
                     /tissue_type="testis"
                     /geo_loc_name="USA: New York, Orient Harbor"
                     /lat_lon="41.137904 N 72.315392 W"
                     /collection_date="2021"
     gene            1..759
                     /gene="LOC138334543"
                     /note="serine-aspartate repeat-containing protein C-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:138334543"
     CDS             1..759
                     /gene="LOC138334543"
                     /codon_start=1
                     /product="serine-aspartate repeat-containing protein
                     C-like"
                     /protein_id="XP_069139298.1"
                     /db_xref="GeneID:138334543"
                     /translation="
MKLYFCIEHNDEVDDDADEVDNGDDEVNDGDGDDEVDDGDDAVDDGYDDVDDGDDEVDDSDDEDDDSDDKVNDGAGDGDDEVDDGADEVDDGDDEVDDGADEVDDSIDEVDDCVNEIDDGADEVDDGDDEVDDDADGVDDGDGEVDDEVDDGDDEVDVGDDVSLTMVLMMVMMRLTMVLMRLKMVLMRLTMVDDRDDEEVDDGDDEVYDGDDEVGDGANEVDDGDDDGADVVDDEVDDDVDDGDDEVNDGDE"
ORIGIN      
atgaaattatatttttgtattgaacataatgatgaggttgacgatgatgctgatgaggttgacaatggtgatgatgaggtcaacgatggtgatggtgatgatgaagttgacgatggtgatgatgcggttgacgatggttatgatgatgttgacgatggtgatgatgaggttgatgatagtgatgatgaggatgatgatagtgatgataaggttaacgatggtgctggggatggtgatgatgaggtagacgatggtgctgatgaggttgacgatggtgatgatgaggttgacgatggtgctgatgaggttgacgatagtattgatgaggttgacgattgtgttaatgagattgacgatggtgctgatgaggttgacgatggtgatgatgaggttgacgatgatgctgacggggttgacgatggtgatggtgaggttgacgatgaggttgacgatggtgatgatgaggttgacgttggtgatgatgtgagtttgacgatggtgctgatgatggtgatgatgaggttgacgatggtgctgatgaggttgaagatggtgctgatgaggttgacgatggttgacgatcgtgatgatgaggaggttgacgatggtgatgatgaggtttacgatggtgatgatgaggttggcgatggtgctaatgaggttgacgatggtgatgatgatggtgctgatgttgttgatgatgaagttgacgatgatgttgacgatggtgatgatgaggttaacgatggtgatgaatag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]