2025-07-03 17:37:06, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_063980347 3757 bp mRNA linear INV 26-MAR-2024 DEFINITION PREDICTED: Ostrinia nubilalis copper-transporting ATPase 1 (LOC135085576), mRNA. ACCESSION XM_063980347 VERSION XM_063980347.1 DBLINK BioProject: PRJNA1089545 KEYWORDS RefSeq; includes ab initio. SOURCE Ostrinia nubilalis (European corn borer) ORGANISM Ostrinia nubilalis Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Pyraloidea; Crambidae; Pyraustinae; Ostrinia. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_087116) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963855985.1-RS_2024_03 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 03/21/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..3757 /organism="Ostrinia nubilalis" /mol_type="mRNA" /db_xref="taxon:29057" /chromosome="29" gene 1..3757 /gene="LOC135085576" /note="copper-transporting ATPase 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:135085576" CDS 383..3757 /gene="LOC135085576" /codon_start=1 /product="copper-transporting ATPase 1" /protein_id="XP_063836417.1" /db_xref="GeneID:135085576" /translation="
MESANEATEMLEKKKEEPSQELVAVRVPINGMTCQSCVKSIEGSVSELPGVQYVKVELSEHAGYFRYDPRACSAAAIRAHIHDMGFDVPGDDEARSLLPKPIPTDLLIDMGTSSEESEVVLHVTGMTCQSCVNTIEGTLKEMPGVVSASVDLPSGIARVRSTLAVTPQQIADAVYNLGFDVSINETNSQNNSQEGSGDSAKPPTPVKSKTHANGTASPMADRQTEPVELSCCTLEVKGMTCASCVAAIEKSCSKLYGVHSIVIALLAAKAEVKYEPAKISAADVARSVTELGFPAEVRADCDGSGQKEMQVLIKGMTCASCVNKIEKTVLKLPGVVSCAVALTTSKGKIKYMAEQIGPRSICDAINSLGFEASVVGPRDRGTTHYLEHKEEIKRWRTAFLISLLFGGPCMVSMAYFMAHMEHGHIAVLPGLSLENLIMFLLATPVQFVGGWHFYKQAIKALRHGTTNMDVLISMTTTISYAYSLAVVIAAMAMQQDTSPMTFFDTPPMLLVFVSLGRWLEHIAKGKTSEALSKLLSLKATEAVLVTLDDDENVVSEKSIPIDLVERGDVLKVVPGAKIPVDGKVISGHSTCDESLITGESMPVQKTKDSLVIGGSINQNGALLMRATHTGEASTLAQIVRLVEEAQSSKAPVQRLADNIAGYFVPLVMFLSLLTLVCWIISGAINIQNIKNITPDMYLNKFTRWELIVQTAFHFALSVLAIACPCALGLATPTAVMVGAGVGAAQGLLLKGAEPLENAHKVKTVIFDKTGTITRGSMAVAHVSLLTGSANTLPDVVACLLAAETNSEHPVAAAIVKWCTSVLGESTPLKCVGFVAAPGCGLRARLRTKRDQSVDIPSLKNVLNQAKVGNSFELHGVCVQVLASDGDAALSSAQAAARLHTLIKTDNEGEEVEQVVLIGNRKWMNRNGVPVPRSVLEALLRDEELGRTAVLAAINDQLVCTIGISDEVKPEAHLAVYCLKKMGLEVCLLTGDNRKTAVAIARQVGINKVYAEVLPSHKVAKIQKLQEQGQKVAMVGDGVNDSPALAQADVGIAIASGTDVAVEAADLVLMRNDLLDVVACLTLSRATVRRIRLNFIFASVYNLLGIPLASGAFAAYGLQLQVRAR"
ORIGIN
tgtcaaaatgacgtaaagggaaaagtgaccaaaagttttttctttgcaatagaaataggatttttacgctaaaacattgtgtaattaaattgtgaaactcatcccaataaacctggtagactctagaaagccaacgtggctcatattatgtacaattttgtgaattttcgcttaaaactgggctaacctaaccagtttggttttcagtggagagtatattgttatttatcgtttttgttgtaatcgtgcggtgttaacaagtgtttgagtggtttctatgtaggtcattagcatatagagttctttgtacgagtggtcaacgacatgagaatgacttggagtgaggcctgattgaaaacatagatcttcagcagacaacaagatggagtcagctaatgaagccactgagatgctggagaaaaagaaagaagagcccagccaagagctggtggcggtgcgggtcccgatcaatggcatgacatgccagtcgtgcgtgaagagcatagagggctctgtaagcgagctgcccggcgtgcaatacgttaaggtggagctatcagagcacgcgggctacttccggtatgacccgcgcgcgtgctccgctgccgccatccgcgcgcacattcacgacatgggtttcgacgtgccgggcgatgacgaggccagaagtctcctaccaaagccaatacccaccgatcttctgatagacatggggacgtcaagcgaagagagcgaggtggtgctacacgtcaccggcatgacttgccagtcgtgcgtcaacaccatcgaaggcacactgaaagagatgccaggagtcgtatcagcgtccgtagacctaccctcaggcatagcgagggtacgctcaacgctggcggtgactccgcaacagatcgctgacgctgtttataacttgggcttcgacgtcagcatcaatgaaacaaattctcagaacaactcccaagaaggatctggtgatagtgccaaaccaccaacacctgttaaaagcaaaacacacgcaaacggcacagcgtcgcccatggcagacagacagacagagccagttgaactgtcctgctgcacgctggaagtgaaaggcatgacgtgcgcctcctgcgtcgctgctatagagaagagctgttccaagctgtatggcgtccactcaatagtaatagcccttctagcagcgaaggcagaagtcaagtacgagccggcaaagatttctgcggcagacgtggctcggtccgtcaccgaacttggattcccggccgaggtgcgagccgactgcgacggcagcgggcagaaggagatgcaggttctgatcaaaggcatgacgtgcgcgtcgtgtgtcaacaaaatagagaagactgtgctcaaattgcccggcgtggtttcttgtgcagtcgcgctcacaacttccaagggcaaaataaaatatatggcggagcagataggcccccggagtatatgcgacgcgatcaactccctcggcttcgaggcttcggtcgtgggaccgagagataggggcactacccactacttggagcacaaagaagaaattaaaagatggcggacggcgttcctcatatctttgctattcggcgggccctgcatggtgtccatggcttacttcatggcgcacatggagcacgggcacatcgcggtgctgccgggcctcagtctggagaacctcatcatgttcctgctcgccacgcctgtgcagtttgtgggcggctggcacttctacaagcaagcgatcaaggcactgcgacacggcaccactaatatggacgtacttatatcaatgactaccactatcagctacgcctactcgctggcggtggtgatagcagccatggcgatgcagcaagacacgagtcccatgacattcttcgacacgcctcccatgttactggtgtttgtctcgctgggccggtggctggagcatatagccaagggtaaaacctccgaggctctctccaagcttctctccctgaaggctacggaggcggtgctggtgacgttagacgatgacgaaaatgtggtctctgagaagagcatccctattgacctggtggaaaggggggatgtgctcaaggtggtccctggagccaaaatacccgtggatggcaaggtgatatctggccacagcacgtgcgacgaatctctcatcacgggcgagtctatgccagtgcaaaaaactaaagattccctagtaataggcggcagtataaaccagaacggagctttgttgatgcgagcgactcatacgggcgaagctagtaccttagcacagatagtgcgactggtagaggaagcgcagagcagtaaggcccccgtgcagaggctggctgataatatcgctggctacttcgtcccgctggtgatgtttctgtcgctgctgacgctcgtctgctggatcatcagcggcgccatcaacatacagaacataaagaatatcacgccggatatgtacctaaacaagttcacccgctgggagctgatcgtccaaacggctttccacttcgcgctatccgtgttagcgatcgcgtgtccctgcgcgctggggctggccacgcccaccgccgtcatggtgggcgccggcgtgggcgccgcccaggggctgctgctcaagggcgccgagccgctggagaacgcgcacaaggtgaaaacagtgatattcgacaagaccggcaccataacccggggcagtatggcagtggcccacgtgtcgcttctaaccggttcagccaacacattacctgacgtggtcgcttgtctactggctgctgagaccaactcagagcatccggtcgctgcagcaatagtgaaatggtgcacttcagtactaggcgagagcactcctctaaaatgcgtggggttcgtcgcagcaccaggctgtggactacgcgctagattgaggacgaaaagggaccagagtgtggatataccttcgttgaaaaacgtgctgaatcaagccaaggtgggcaattccttcgagctacacggcgtgtgcgtccaagtgttggccagcgacggcgatgctgccttaagttcagcgcaggcagctgccaggctgcacacgctgatcaagactgacaatgagggagaggaagtggagcaggtggtgttgataggcaaccggaaatggatgaacaggaatggggttcccgttccacgttcagtcttggaggctctcttgagggatgaggagttgggaaggacagcagtactggctgctatcaacgaccagctagtgtgtacaataggcatatcagacgaggtgaagcccgaagcccatttagcggtgtactgcctcaagaaaatgggcttagaagtatgtctgcttacgggagacaatcgcaagaccgccgtggctatagcgcgacaagtcggcattaacaaggtatacgcagaggtgctgccctcacataaagtggcgaaaatacagaaactgcaagaacagggacagaaagttgctatggttggtgacggcgtgaacgattcgccagcgctcgcgcaggcagatgtgggaatcgccatcgccagtggaaccgacgtcgccgtagaagccgctgacctagtgctcatgaggaacgatttactagacgtagtggcgtgcctcactctctctcgagccacggtgcggcgcatccgactcaatttcatcttcgcctcagtatataatctgctgggaatcccgctggctagcggcgccttcgccgcctatgggctgcagctgcaggtaagagctagatag
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DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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