LOCUS       XM_063620841            2485 bp    mRNA    linear   PRI 17-JUL-2024
DEFINITION  PREDICTED: Symphalangus syndactylus retina and anterior neural fold
            homeobox 2 (RAX2), transcript variant X1, mRNA.
ACCESSION   XM_063620841
VERSION     XM_063620841.1
DBLINK      BioProject: PRJNA946760
KEYWORDS    RefSeq.
SOURCE      Symphalangus syndactylus (siamang)
  ORGANISM  Symphalangus syndactylus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hylobatidae; Symphalangus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_072439) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_028878055.3-RS_2024_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/16/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Symphalangus syndactylus"
                     /mol_type="mRNA"
                     /isolate="Jambi"
                     /db_xref="taxon:9590"
                     /chromosome="17"
                     /sex="male"
                     /cell_line="Jambi"
                     /cell_type="lymphoblastoid"
                     /tissue_type="blood"
     gene            1..2485
                     /gene="RAX2"
                     /note="retina and anterior neural fold homeobox 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 Proteins"
                     /db_xref="GeneID:129465352"
     CDS             264..950
                     /gene="RAX2"
                     /codon_start=1
                     /product="retina and anterior neural fold homeobox protein
                     2 isoform X1"
                     /protein_id="XP_063476911.1"
                     /db_xref="GeneID:129465352"
                     /translation="

MVNFYSYLKTQLKGSLPLVSRGANCSAFTSGPQLPQLPLTSVGAMFLSPGEGPAAEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFGPTFADGFALEEASLRLLAKEHAQALDRAWPPA"

     misc_feature    477..647
                     /gene="RAX2"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     polyA_site      2485
                     /gene="RAX2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ccaggctggagtgcaatggcacgatcttggctcactgcaagctccaccccaccaggttcaagcaattctcctgcctcagcctcccaagtagctgggatttataggcacccactaccacgcccggctaatttttgtatttttagcagacagggttttgccttgttggccaggctggtctcaaactcaggacctcaggtgatccacccgcctcggcctcccaaagtgctggggttacaggcgtgagccactgcgcctggctgtgaatggtgaacttctattcatacctcaagacccagctaaaagggtccctaccccttgtgtccagaggagccaactgcagtgccttcacctctggacctcagcttccccaactgcctctgacatctgtgggagccatgttcctgagcccgggcgaggggccggcagccgagggtgggggtctggggcccggcgaggaggcccccaagaagaagcaccggaggaaccgcaccaccttcaccacctaccagctgcaccagctggagcgggcgttcgaggcctctcactacccggatgtgtacagccgtgaggagctggcggccaaggtgcacctacccgaggtgcgcgtgcaggtgtggttccagaaccgccgggccaagtggcgccgccaggagcggctggagtcaggctcgggtgccgtggcagctccgagactacccgaggccccagcgctgccgttcgctcgccccccggccatgtcgctgcccctggagccctggttgggccccggaccgccggctgtaccaggcctcccccgcctcctgggcccaggcccagggctgcaagcgtccttcgggcctcatgcctttggtcccaccttcgcagatggcttcgccctggaagaggcgtccctgcggctgctggccaaggaacatgcacaggctctggacagggcctggccgccggcctgagcctgctgccctcccgggccccctcctctgcccgacccgagaaccggggacatgccctggtgacagccaccacgccttggcctaggtgaaggtcatggagcaaccgtggtcaggccaggccaggccaccaccactggggagcaggaccagaaagacaggctgctgggtcctctgcccccatcccatcccccaccccatcgccacccgtcctgctggcagcggaccggcccccagtgtcaggcaggaggtgacccaagtatttcttaggctaggggcggggccctcctcctctcctggggcctcagtctcccgtctatgaattgagcatgggggactctgaggttcacggtttgcgaggctgtgggtgcctgcagggccgctgactctgtaagatgagtgtaaatctctctgctgatcctaatccccatcagcagagctgcccactctgcaggctcccagtcccctggaaataacaaatagcggcagttcccgcaagcctggtctcctttcaccatgtgcccgccatgtgagcgctcccctctccattacgccctggacctcgggcacggctgtcagcccattctacagagagggaaaccggggctcaggcaggaagccaggtccccaagtttgcacggccaggagtggatggagctgcttttcatacccatcaccagtcctaccgtccggggcacagcgacaggttctggagggagcgtgggtcccgggccaggtgctggtggggccctcgtgtggaggtgggctgatgctgggcgtgtcatcattgtcagcccgttcctcacgtccccacagaccccaggccctgtgcctgtcccctgcggaggcacggccagcatctgctctgtctaacccagtcgcattgcccaagagctctgagcaaggaggctgtcacgagaccgaggacccgctgggactggcaagcatggctggcccagtgcatcaggaggggccctgagccatgggatgggacagcctgggccagcaccaccccccggggacagaagtgtggggccagggcaggagctgcagtagctaccctccccatctccagcccaggctccccagatcactcccagatcaccagggcaccccatctctaggcagcacctcacacaccagtcctgtggcccaacacccagccatcacccaatgtcaccgtgcaccaggcactggggatgccgcagtaagcacatgaaagatttgttttcaaaagctaaaccaggccaggtgcggtggctcatgcctgtaatcccagtgctttgggaggctgaggtgggaggattgcttgagaccagcctgggtgacatagcaagtccccgtctccacaaacatttttaaaatgtgccgggtgtagtggtgcacacctgtcatcccagctacccaagaagctgagacaaaaggatcgcttgagcccaggtcgaggctgcagcgagctgtgatcacaccgctgcactccagcctgtgcaacagagccagaccctgactcaaaacaaataaaaacaaatctaaaaaga

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