LOCUS       XM_062033501            6681 bp    mRNA    linear   VRT 02-JAN-2024
DEFINITION  PREDICTED: Entelurus aequoreus zinc finger protein 638-like
            (LOC133639849), transcript variant X2, mRNA.
ACCESSION   XM_062033501
VERSION     XM_062033501.1
DBLINK      BioProject: PRJNA1055515
KEYWORDS    RefSeq.
SOURCE      Entelurus aequoreus (snake pipefish)
  ORGANISM  Entelurus aequoreus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei;
            Syngnathidae; Entelurus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_084752) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033978785.1-RS_2023_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/22/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6681
                     /organism="Entelurus aequoreus"
                     /mol_type="mRNA"
                     /isolate="RoL-2023_Sb"
                     /db_xref="taxon:161455"
                     /sex="male"
                     /tissue_type="Whole Body minus internal organs"
                     /dev_stage="adult"
                     /geo_loc_name="Sweden"
                     /collection_date="2022-06-15"
                     /linkage_group="LG22"
     gene            1..6681
                     /gene="LOC133639849"
                     /note="zinc finger protein 638-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:133639849"
     CDS             396..6056
                     /gene="LOC133639849"
                     /codon_start=1
                     /product="zinc finger protein 638-like"
                     /protein_id="XP_061889485.1"
                     /db_xref="GeneID:133639849"
                     /translation="

MYHHRSQSQDQQSFPSVSRLGQNQQTHLQHNSPASNMHGFPFPRRTQLPDELESALSIRGARDTDHRLSDHTNQQSQHQGKRQVSIVSQHGGYSSSPIAHSSDNQANQQRADWSSFQPPNKLFASPTSGGSHHSHHPGPHQQSQSNQTGTTIPSWTSGNMSSSQVQRLCRVGAQGQGLYTPENAGSILASFGLSNDDLEVLSHYPDDQLTPDTLPFILRDIQINKSDNQNTVAPNIHDKLLLPTTSSQLKGSSSPEVPSLLTVTKTAGQVIDYGHASRVKDSTTTKTFKREKLSSARKVQMYPSSSSTSTSKVEKVEKRQVRLVHVESSRHGDRDYRRTSSDHHKRSRSRSSDGPPSKSRIADKDYRHNGSKPRFSAEPKNELPSRHSSSSSSGTASQDTSKKLPTSALISDFSGTCPKVFPHSCTLCHIECDHEKDWFDHVNTVNHTAACRDLRNKYPEWKLDRKSPTHSASGLEPPSHKPGWSYSHNDRYHYFAGGGSSQSGLKRPYNDLNKQSDTSLKFSNSKADHGRSHFSANTDKKATRPGNKTTKTAPTKADEHSTKPPPAKKKNTSTSALSDSIEERLVYLTGIPKQTTEQEVTKLVASFGKINNVILIPCFEKESDTLKASVCMEKAADAQALANSANIKIGDQLITASVAKKSEPGQSPVCSNSKPISSLDKVADRKDLTVDANQNILAKKGLVLITGLPGCDCSESDIIELIQPFGHPTDIILASSVRKVLVSLPDVATAQEVVKVHSSTPAKMKDCELKMVNIKQHIGIDTPVALYNLLMESLDPLESSVPVGWNSLLVISNVPNTSTSSSDVKQLVERFGTVVKSLELKNMVICEMTTAPMALSVYKRFQRFPCVIQSNHLLFSRKPDPKASTRTQICSPNLHSPKDILERDDCKSGANNQEAKGNEENYSLKKNKQGPEMLNSPEKVVSEDEEMAKNGSKIVTNTDQVPYSAYEADRLSKTNKVNIPAIQADMKTNKELSVEADMKTNKKMSALETDKEIPTIETYMKTVKEMSIETDMKTDKDISAIKTDTKTEMDTSAIETDMKTDKDMSAIETDMKTDKDMSAIETDTRTDKDMSAIETDTKTEMDTSAIETDMKMDKDMSAIETDTRTDKDMSVIETDTKTDKEMSAIETDTKTDKEMSAIETDTKTDKEMSAIEADTKTDKEMSAIKTDTKTEMDTSAIETDTRTDKDMSAIETDTRTDKDMSAIETDIRMDKDMSTIKTDTKTDKEMSAIEADMKTDNEMSAIETYTKTDKEMSAIKTDTKTDKEMSATETDTKTDKDMSAIKIDLKTDKEMFVIDTHRPTIETDIKTEKKMSDVETDMNTDKKMSDIETDMKTDTEMTVIDTNMSTIETDMKADKTVTTIKTVMQTTINETKLGEEISTDMAIAELTKDAQKAKDTGKRTGGLSNKMAISADGDQTHLESEREKADDETKETRRKRAVDVTNESVKSHIEPALRTQDRVRIEREARREKEAKERERREKERRLWEKERRAKWENEREERIMRHRRERERRDRKRDRDDRSLELRSSYRSETHKTSSFDKPATSRKSDAKPPEMGMDGDFDSFPFNMSEFVTVDEVGDVIDFPNSPPAAAPEDTTKQEQQDSPTCVPQSALEDTPLEITEGMLICQPVKSDDPLTECQHQPIKSDEPITDCQHQFGDSISGCEDPPTFSAETNLSSDVMGMLSCETAAPPTEAQQEISPFDPNLVPACQPEECETDGPTTEMGMTAEIKAAEGKEDKTATLDSSPGKESVTMMLNKEEEKMQKTEDKETSIPSQEPVKHEVSENPTITEKKSDIETPTTTDNALHFDPSNPVGMEFLMPKTGFFCKVCNRFFSGNKDAQITHCKTFKHFENLQKHLERNKKVDATSS"

     misc_feature    2145..2378
                     /gene="LOC133639849"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    2508..2693
                     /gene="LOC133639849"
                     /note="RNA recognition motif (RRM) superfamily; Region:
                     RRM_SF; cl17169"
                     /db_xref="CDD:473069"
     misc_feature    3351..>3965
                     /gene="LOC133639849"
                     /note="RNA polymerase sigma factor; Provisional; Region:
                     PRK05901"
                     /db_xref="CDD:235640"
     misc_feature    <3498..4517
                     /gene="LOC133639849"
                     /note="MSCRAMM family adhesin clumping factor ClfA;
                     Region: MSCRAMM_ClfA; NF033609"
                     /db_xref="CDD:468110"
     misc_feature    5910..6017
                     /gene="LOC133639849"
                     /note="U1-like zinc finger; Region: ZnF_U1; smart00451"
                     /db_xref="CDD:197732"
ORIGIN      

caagaaggagtaggaacactcggcggtgtgattcagtgtacaaaagtgtatttctgtttttcacctcacagtcacgctgtgcatacagagtaatttgcatcttgcgtgccgccttcatttggagtccatttcaacattatctgtgacccaacagcaccagaggagaccctttttgcatttggatcttcagcagatgatactttcaacactttgacaagattgacattggttttaggtatctctctttccttgtggcaaaacagttgaagcaacatgttcagagccacgactggactgctgagttaccctagcacctgatccgcacaaatattctcaatagaaaaagactgtcaaactgcaaaactatcacactacaactggatctgtctgctgctatgtatcaccaccggtctcagtcacaagaccaacagtctttccccagtgtgtcaaggcttggtcagaatcaacaaacacatctacaacataattcacctgcctctaacatgcatggcttcccatttcctcgccgtactcaacttcctgatgagctagagtcagctctgtctattcgaggagccagggatacagaccaccgcctatctgaccacacaaatcagcaaagtcaacatcagggaaaacgccaagtgtctatagtcagtcaacatggaggctacagttcaagcccaatagcacacagctctgataatcaagcgaatcagcaaagggcagactggtcaagctttcagcctccaaataaactgtttgcaagccctacatctggtggaagtcatcactctcatcatccgggccctcaccaacagtctcagagtaaccaaacaggaacaaccattccaagttggacatcaggcaacatgtcctcttctcaagtccagcgactatgtcgtgttggtgcgcaaggccagggtttgtatacacctgaaaatgcaggaagtatcttggcaagctttggactatcaaatgacgaccttgaagtgttgagtcattacccagatgatcagcttaccccagacacattgccgtttatacttcgtgacatacaaatcaacaaatcagacaaccaaaataccgtggcacccaacattcatgacaagctgctccttccaacaacctcttcccagctcaaaggttcatcctcccctgaagtacccagtcttctgactgttacaaaaacagcaggtcaagtcattgactatggtcatgccagccgagtaaaggacagtactactacaaagacttttaaaagagagaaactttcaagcgcaagaaaagttcagatgtacccatcatcatcctctacatccacttcaaaagtagaaaaggttgaaaaacgccaggtacgtttggtacacgtggaatcgagcaggcatggagaccgggactaccgtaggacaagtagcgaccatcacaagaggagtcggtcacgcagtagtgatggtccaccatctaaatctcgtattgcagacaaagactacaggcacaatggatcaaagccaaggttctcagctgaaccgaagaacgagctgccctcaaggcactctagttcctcttcatctggcacagcttcacaggataccagcaagaagttgcctacttctgccttgataagtgatttctctggcacgtgtccgaaagtgtttcctcattcctgcaccctgtgccacattgagtgtgatcatgaaaaggactggtttgaccacgttaatactgttaaccacacagccgcctgcagggacctgcgcaacaagtatcctgaatggaaactagatcggaaaagccctacccacagcgcgagcggattggagcctccttcccacaaacctggctggtcttattctcataacgaccgttaccattactttgcaggaggtggatcaagtcaaagtggtttgaagcgcccttacaatgatctaaacaaacaatctgacaccagcttgaagttttctaactccaaggctgatcatggacgatctcacttctccgctaatacagacaagaaggcaacaaggcctggaaacaaaaccactaaaactgcacctaccaaggctgatgagcattccactaagcctccaccagccaaaaagaaaaacacatcgacttcagcattatcagactccatagaagaacgcctcgtttacctgactgggattccaaagcaaaccacagagcaggaagttactaaattagtggcgtcctttggcaagatcaacaatgtgattctcatcccatgctttgaaaaagaaagtgataccttgaaggcatcggtgtgcatggaaaaagctgcagatgctcaggctttggcaaactctgcaaacatcaaaattggagatcagctaatcactgcttcagtggccaagaaatcagaaccaggccagtctcctgtctgctccaacagcaaacctatttcaagtttggacaaagttgcggatagaaaagacttaacggttgatgctaaccagaacattttggcaaagaagggcttagtgcttatcacaggacttcctggttgtgactgctcagaaagtgacatcatcgagctcattcagccattcggacatccaactgacattatcttggcatcgtcagtcagaaaggttctcgtgtctctgccagatgtggcaactgctcaagaggtggtgaaagttcactcttcaactcctgcaaaaatgaaggattgtgaactcaagatggtgaatatcaagcagcatattggcatcgacacaccggtggctctctacaatctactgatggagtcactggacccattggagagttcagttccagttggctggaacagtctcttggtgatcagtaatgttcctaacacatcgacaagctcctcagatgtaaagcaactggttgagcgttttggcacagttgtcaaaagtctggaactcaagaatatggttatttgcgaaatgacaactgcacctatggcgttgtctgtctacaaacgtttccagagattcccatgcgttatccagagcaaccatctgttattttcgcgcaagccggaccccaaagctagcacacggactcaaatctgttctccaaacctgcattcacctaaggatattcttgaacgtgatgactgcaaatcaggtgcaaacaaccaagaggcaaaaggaaatgaagaaaactattctctgaaaaagaataaacaagggccagagatgttaaacagccctgagaaggtggtcagtgaagatgaagagatggcaaagaatggaagcaaaattgtcacaaatacagaccaagtgccttattctgcatatgaggcagacagactgtcaaagaccaacaaggtaaacataccagctattcaagcagacatgaagaccaacaaggaattgtcagttgaagcagacatgaagacgaacaagaaaatgtcagctcttgaaacagacaaggagatccccactattgaaacatacatgaagaccgtcaaggagatgtctattgaaacagacatgaagacggacaaggacatatccgctattaaaacagacacaaagacggaaatggacacgtccgctattgaaacagacatgaagacggacaaggacatgtccgctattgaaacagacatgaagacggacaaggacatgtccgctattgaaacagacacgaggacggacaaggacatgtccgctattgaaacagacacaaagacggaaatggacacgtccgctattgaaacagacatgaagatggacaaggacatgtccgctattgaaacagacacgaggacggacaaggacatgtccgttattgaaacagacacgaagacagacaaggagatgtccgctattgaaacagacacgaagacagacaaggagatgtccgctattgaaacagacacgaagacagacaaggagatgtccgctattgaagcagacacgaagacagacaaggagatgtccgctattaaaacagacacaaagacggaaatggacacgtccgctattgaaacagacacaaggacggacaaggacatgtccgctattgaaacagacacgaggacggacaaggacatgtccgctattgaaacagacataaggatggacaaagacatgtccactattaaaacagacacaaagacagacaaggagatgtccgctattgaagcagacatgaagacagacaatgagatgtccgctattgaaacatacacgaagacagacaaggagatgtccgctattaaaacagacacaaagacagacaaggagatgtccgctactgaaacagacacgaagaccgacaaagatatgtctgctatcaaaatagacttgaagacggacaaggaaatgttcgttattgatacacacaggcccactattgaaacagacataaagactgagaagaagatgtctgatgttgaaacagacatgaacactgacaagaagatgtctgatattgaaacagacatgaagacagacacggagatgaccgttattgatactaatatgtccactattgaaaccgacatgaaggcggacaaaacggtgacaactattaaaacggtcatgcagacaaccataaatgaaactaagctcggagaagagatatctacagatatggccatagcagagttaaccaaggatgctcaaaaggcgaaagacaccggaaaaagaactggcggcctttcaaataaaatggcaatttctgcagatggagatcagacacatctggagtccgagagggaaaaggcggatgatgaaacaaaagagacgaggagaaaaagagcagttgatgtaacaaacgagtcagtaaagagccacatagagccggctttaaggacacaagacagggtgagaattgaaagagaggccagaagggagaaggaagcaaaagagagagagagacgagagaaggagaggagactctgggagaaggagcgcagggccaaatgggagaacgagcgggaggaaagaattatgagacataggcgtgaaagagaaaggagggatagaaagagggatcgtgatgataggtccttagaacttagatcatcttacaggtcggagacacataagacctcctccttcgataagccggcaacttcaagaaaatcagatgctaagccacctgaaatgggtatggatggggattttgattcctttccatttaacatgagtgaatttgtgaccgtggatgaagtaggggatgtgattgacttccccaactctcctcctgctgctgctccagaggatacgacaaaacaagagcaacaggattccccgacatgtgtcccacagagcgctcttgaggacacacctttggaaatcacagagggaatgttaatatgtcagcctgtgaagtctgatgaccccttaacggagtgtcaacatcagcccattaagtccgatgagcccataactgattgtcagcatcagtttggtgattccatatcaggatgtgaagatccgcctacattctcagctgagaccaatttatcatcggatgtgatgggcatgctgagctgcgaaactgcagccccacccacagaagctcaacaagaaatctctccctttgacccaaaccttgtgccagcttgtcaaccagaagagtgtgagacagatggtcccactacagagatgggtatgactgcagaaattaaagctgcagaaggaaaggaagataaaacggcaaccctggatagcagccctggaaaggagagtgtgaccatgatgttgaataaagaagaggaaaagatgcaaaaaacagaggacaaagagacaagcattccatctcaggagccagtaaagcatgaggtgtctgagaacccaacaatcacagaaaagaagagtgatatagaaacgccaacaactacagacaacgctctccattttgaccccagcaacccagttggtatggaattcttgatgccaaaaaccggcttcttctgtaaggtgtgtaaccgtttcttcagcggaaacaaggacgctcaaatcactcactgcaaaaccttcaagcattttgagaacctgcagaaacacttggagaggaacaaaaaggtggatgcaacgtccagctgattttgttaacagcttttgagcgaataacgacattcatcttgttttatttcttgttgcacctgtgaaacgatgacctacaaatgttttatcttcagtccactgcgacagtaagtcatcaatcatttgtattcttcagactttctgatcaagatccaggttcaatttctttaaacgactgcagtaactgaactaaaaaaatcaatacatgatctttaggcacactatatgatttcaaaacagtaaccctaaagatactcattatttatgtggtcttcttcacgtggttgtgagagagaatagattggctgatgaaagatgtttcagatatttgaacatatttgatgtaactgacatcaaataccattaatcagtgcatgtctcatagatttcttcatagatgttttagcgtagttagtctagtcagttattgttctgatcctgtttaaacacttggacatttttcatgtaatattcaatggaaaatgggccaattctgatttacaaacatgactgcaaataatttttctgatttagttttttgtttttcttttactttttcagcttcttgattagttgaccttgtactttgcattaaagagcttgcttggtatgacactttgattag

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