LOCUS       XM_058553671            6184 bp    mRNA    linear   MAM 31-JUL-2023
DEFINITION  PREDICTED: Diceros bicornis minor argonaute RISC catalytic
            component 3 (AGO3), transcript variant X4, mRNA.
ACCESSION   XM_058553671
VERSION     XM_058553671.1
DBLINK      BioProject: PRJNA998007
KEYWORDS    RefSeq.
SOURCE      Diceros bicornis minor
  ORGANISM  Diceros bicornis minor
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae;
            Diceros.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_080752) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_020826845.1-RS_2023_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/26/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6184
                     /organism="Diceros bicornis minor"
                     /mol_type="mRNA"
                     /isolate="mBicDic1"
                     /sub_species="minor"
                     /db_xref="taxon:77932"
                     /chromosome="13"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="juvenile"
                     /geo_loc_name="USA"
                     /lat_lon="32.1795 N 97.7972 W"
                     /collected_by="Budhan Pukazhenthi"
     gene            1..6184
                     /gene="AGO3"
                     /note="argonaute RISC catalytic component 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:131413135"
     CDS             185..2155
                     /gene="AGO3"
                     /codon_start=1
                     /product="protein argonaute-3 isoform X4"
                     /protein_id="XP_058409654.1"
                     /db_xref="GeneID:131413135"
                     /translation="

MRKRFLLSSYRVPGTISATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLENGQTVERTVAQYFREKYTLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLPAPMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHQDTLRTMYFA"

     misc_feature    254..616
                     /gene="AGO3"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(410..412,455..457,497..499,509..511,563..565,
                     584..586,590..592)
                     /gene="AGO3"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    749..2026
                     /gene="AGO3"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1160..1162,1172..1174,1208..1219,1226..1228,
                     1250..1252,1259..1261,1271..1273,1283..1285)
                     /gene="AGO3"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1364..1366,1370..1372,1580..1582,1994..1996)
                     /gene="AGO3"
                     /note="active site"
                     /db_xref="CDD:240015"
     polyA_site      6184
                     /gene="AGO3"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

taacagaaatttttagttctgacacagtggaaagcaaatttaagaatcctaatctcttcttcatggaacatttctcccgtacaacctcttcaaggagttagtttacatcgacaaaaccgttttgcctagaattaagaccttggtaaatcagcaagcaaggacatgagtagacacttctgcaaaaatgagaaaaagatttctgttgagctcctatcgtgttccaggcacaatttctgccactgccttctacaaagcacaacctgtaattcaattcatgtgtgaagttcttgacattcataatattgatgagcaaccaagacctctgactgattctcatcgggtaaaattcaccaaagagataaaaggtctgaaggttgaagtgactcattgtggcacaatgaggcggaaatatcgtgtttgtaacgtaacaagaaggcctgccagtcatcaaacctttcctttacagttagaaaatggccaaactgtggagagaacagttgcgcagtatttcagagaaaagtatactcttcagctgaagtacccacaccttccctgtctgcaagtggggcaggagcagaaacatacctatctgccgctagaagtctgtaatattgtggcagggcaacgatgtatcaagaagttaacggacaatcagacttctactatgatcaaagcaacagcaagatctgcgccagatagacaagaggaaattagcagattggtaagaagtgcaaattatgaaacagatccatttgttcaggaatttcaatttaaagttcgagatgaaatggcccatgtaaccggacgagtacttccagcacctatgctccaatatggaggacggaatcggacagtagcaacaccaagccacggagtatgggacatgcgagggaaacaattccacacaggagttgaaatcaaaatgtgggctatagcttgttttgccacacagaggcagtgcagagaagaaatattaaagggtttcacggaccaactgcgtaagatttctaaagatgcaggaatgcccatccagggccagccttgcttctgcaaatatgcgcagggggcagacagcgtggagcccatgttccggcatctcaagaacacctactctggcctccagctcattatcgtcatcttgccggggaagacaccggtatatgcggaggtgaaacgtgtaggagatacgcttttgggtatggctacacagtgtgttcaagtcaagaatgtaataaaaacatcccctcaaactctctcaaacctgtgcctaaagataaatgttaaacttggagggatcaataatattcttgtacctcatcaaagaccttctgtgttccagcaaccagtgatctttttgggagcagatgtcactcatccaccagctggtgatgggaagaagccttctattgctgctgttgtaggtagtatggatgcccacccaagcagatactgcgctacagtaagagttcagagaccccgacaggagatcatccaggacttagcctccatggtccgagaacttctcattcagttttataagtcaactcggttcaaacctactcgtatcatcttttatcgggatggtgtttcagagggacagtttaggcaggtattatattatgagctactagcaattcgagaagcctgcatcagtttggagaaagactatcaacctggaataacctatattgtagttcagaagagacatcacacgcgattattttgtgctgataggacagaaagggtcggaagaagtggcaacatcccagctggaacaacagttgatacagacattacacacccatatgagttcgatttttacctctgtagccatgctggaatacagggtaccagccgtccttcacactatcatgttttgtgggatgataactgctttactgcagatgaacttcagctgctaacttaccagctctgccacacttatgtgcgctgtacacgatctgtttctatacctgcaccagcgtattatgctcacctggtggcatttagagccagatatcatctcgtggacaaagaacatgacagtgctgaaggaagtcacgtttcaggacagagcaatgggcgagatccacaagctcttgccaaggctgtacagattcaccaagataccttacgcacaatgtactttgcttaaaaaggccaagaatattctctgagaggaagaactgaaagatgaatcgacatacaacgtatgtttccagtggagtaattgagtggggatgcctccagctatacagaaaccaacactgtgtgggggccagggtctgatctttatgttgatacaaggaagattgtttacttcatcaaggaacacagcaccattatgcaatatgaaaccagccaactgcttttttttgtgcggtctcctgtaggaagtatcgcagttgttttgttttcactttcttgtagtctaacccttttaatgcctttacctcaagttgcttggcagcacaattatctttgcaaaaaaagtaaagaaaaagaaaatgatggtttaaaaaaatacacctacatgaataatcaaagtgattgttcacaattatgtgtgcaaaaaaaatgtgcattcatctattcttgtaaaaggtatctgtgtatattttaaatatatacatgcatacttcatatgcatatatatctggatctacattgataatagatatatatgtgtctctgtatatattttatagttcattccattggggaactttccttccctcttattatccccacaccaccacttttatttctctctctacctcccttgccttcatcacctacattttttttcctaatgctaccagtgacattcaaatgttcatgtatctggttcatttgaatatgaagcatgacaaactagattttaatttttattttgcacaccctactcctgtgtcttgtctcatacacaattctgaatcctcaactcttgatagtgctttcttaagaaacagaattattttatatatacatttgtttttgtgagagtatgtgtctgccccctcctgctctgaacttacatttgccatttgtgcaatgtgtacataagcagtagcaacctaaactattctttttctttagtgagtttgttaaagctgctgtaagtataaaaccttgtcagaagttgtaactctttctctctataagtgatatgtattctaaagccttctgtttctatggattatacatggaaatcccttaaagcttttataaaggataaatattttgaatgattggaactctgtagggttgaagcctctgaaattggatggagggggagttgttgaagtttttaaaaaaattttttttgctagtttacttgctgcctcccataccttaatgtgattttcatatatatatttttatatatatgtgtgtgtatatataaacatatatgtatgtgttttgaagtacagcttccttttcttttatatttattagaatagtgctttaataattatagaaccatattggcaacatcttttatagaaatataatcatgtttattttaagaactgacaacttgtttttgctatcttttagtgcaataagcagttttaatggaaagctgtgtctgacatctttaccacagatagtgggagaaacaggcacctccataattttaaaagggcaaagtaatacagccttaatttcagaaggaaagttttgtaattttcaagtttaaagcatgtcttttaaaaatcataatgaaaatgaaggaagttaaatttcctcaatgagtctgacctttaatgttagaaataaagttgaactttgatttaaaaagtgacagtgaatagcttaagatttagaagatatttaaattctttgaaaatagatcatgtttattgaagaatcatactggttaggtgtccattttcatgtactaaaatcaatcaggaaaatgtaaaatgatattttaaaaatatttttgctaacatcaccagtgtaactttccttttaaaattagggttatggtgacaaaggaagttaggactttgatcattttaaatgagttaaatcactgaaatatgggaaaaagttttacaaaacttttgttttattgacttcacattaagatactaaaaagtattataaagctgtcaaaactgagctcatcagtaacattggattcaggggagctttgcactttgtaactcatgaaaattgcattttaattttttattttttgcactggttcagagtatagatattacagattgtttccagtgggcattgttgttaacctttcagaattccatctgcatgtgaaaacgaatggattagctctttattttctctcttacctataatccactcttattgccaatttactgtattttgagcctaaaatctgagcccgtgtcctccaacaggtatgaaatcttttgtccctctgccagaaaactaggaaagtactgtattttgtatgtctattatactgaagtgtctgaaatgcaatttacaacactgtttcaaagctctttacatgagatagtattgtatagtatatacattttttctcccaacactcccctcctccaaaatattcctataaagcacgtattttttttttaattgaaatgtcattgaatatagtcaggaacatgggcaagaggagaaaatagtatatcctagatggtaaaaacttgattgctctgtgcttgcttggtatgagtacaacatcttcctttatggttgagaggaagagttgcacaaattcacacaggaaactttagggcctgggaagaactgtagataacccttgccctatttactgctttacctaattttcagttacctggtttcacatacgctagagtgaagctcataatttaaatctatttggaaaaaaaaaaaaagattttttgaatataaagctttacctttgaagtgagttcttttttagggtttctttcttacggtttcaacattgctagtttaaggttggttaacttgaaagagtatatatagcatatttctattttgcttactaacaagttggtgtatcaaacttaattatgcgaaatcttgtgcttagaattttacgataaaagtctaagtggcaaatactttttgaaatttgttttaattattattgcacttctggtgtcaaattcttgatcattttatttaaaaaaaaaaagtttgttttgaatttaatagtcatgaaactcaacagtgacctttttgttcctgcccttgctcattaactatataatgaatgctaaattttggtttgctgttttctgtgatgtataagtgactttaaaatgtcagtctcagcaactggtataattgattttcatgtgaagaagagttgggagttaaatgtatattctggacggcaaatgtgtctgtgtaaagtgctgatacatgttattatcttacagtatcaagttactggcattgaggaccatacgtttataatactgtagctgctatatttatttaattaagtagagtctgacagttactgcactaaacaataaggagatgagcaggattcaaggctagtgttgtagatcccctttttttgttcctaaataagattaagaacgtgaactatcaaggtaacaatgggtgctgccattttagtttcagtttaatatcaggatactcttttttttgttttgttttataaatgtggattttgactttagcagttttgaaaaagggtacctcaacctcctcagtactgatttttggcatattttcacagaagtacagatgccctttattttttcttaatatttgccttttaacaagtttctcagaaaaaatattcttctatggaaatcttcctgtttataacctattaatttatttttcttcctagaagagagtctagaagggattctagtaggaatgtactgggtgttttggaaggcaattgataaagattcatctccaccttctagcatagggactcctagccttctaaagacctatactagtattccaaactagattctctgatgacccaccactgcctaatgtttacttgtatattctctagtggattttagtatggcgggcttagtcatgacagacttaaggaatgtctagggaaataaaaggtgacttgccattcagtagaaatggctggcaagaggatctcagtgtttaaagaaaaggtgaacactcagagtgccagtaatagatc

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