2025-06-17 01:34:47, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_056624309 3432 bp mRNA linear PLN 06-JUN-2023 DEFINITION Penicillium argentinense uncharacterized protein (N7532_011818), partial mRNA. ACCESSION XM_056624309 VERSION XM_056624309.1 DBLINK BioProject: PRJNA973687 BioSample: SAMN30185296 KEYWORDS RefSeq. SOURCE Penicillium argentinense ORGANISM Penicillium argentinense Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium. REFERENCE 1 (bases 1 to 3432) AUTHORS Petersen,C., Sorensen,T., Nielsen,M.R., Sondergaard,T.E., Sorensen,J.L., Fitzpatrick,D.A., Frisvad,J.C. and Nielsen,K.L. TITLE Comparative genomic study of the Penicillium genus elucidates a diverse pangenome and 15 lateral gene transfer events JOURNAL IMA Fungus 14 (1), 3 (2023) PUBMED 36726175 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3432) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (24-MAY-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3432) AUTHORS Petersen,C. TITLE Direct Submission JOURNAL Submitted (29-NOV-2022) Department of Chemistry and Bioscience, Aalborg University, Fredrik Bajers Vej 7H, Aalborg, Nordjylland 9220, Denmark COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_026622670). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..3432 /organism="Penicillium argentinense" /mol_type="mRNA" /strain="IBT 30761" /culture_collection="IBT:30761" /db_xref="taxon:1131581" /chromosome="Unknown" gene <1..>3432 /locus_tag="N7532_011818" /db_xref="GeneID:81363288" CDS 1..3432 /locus_tag="N7532_011818" /note="Argonaute linker 1 domain; Mid domain of argonaute; N-terminal domain of argonaute; PAZ domain; Piwi domain" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_056469297.1" /db_xref="GeneID:81363288" /translation="
MHKPYILVKSELAETPMKNLDLQNKRDKRRRRPCRTNLFPYTDSHSHSQFDQSSCLLEDPAHGDDVTPKARDITARPAALAPAALILTDHEARTAPAQANGPQDTGALVASLDDPMAALPGSPSDPALLVNRRDSAQALLDSLSDLAPLGPNDSVLPGSLSVAGSNRCLTGLVVQADLLGEVAKVRQTPSGEPRRRNKSNVMFTSDTPDEGIALFEDKCLNSKQDIKQEAQLDFRDQDVKEKNPLPPVRLPIRRPIYGMKGKKINLRANFFPIRFGPSAVFYAYKVIFEQPPNTKRHVIQVFTSLVKNPEFARFGPPVSDLATWFVTTRKLDIQAKRVGVDPGDDGVPKHVYTVRFKLQGDGRLPLEAVTRGLSNPDVHMKVSNEDFVIQMLNIIVSGYAFNDPGVAITDKSRSKYFYIDDRAEKWNLGGGLECLRGIFSSVRPGPSKFMLNLNVSNSAFYQPLPMDEFYNEFLRMRNEDYDALHRTLRNVKVTVKHLKPLKDDNGNPVPRVKNIWGLATTKDGAPIKDDQQGRLTAKVPSLAADPYDVEFWCQAKDDRGNPTGPGWYISVAKYFKEQYNITARKGLPVLNVGNTARPIYMPMDVCRIIKGQQYNGDLSTAQRQEIIKFSCRRPPDNHETIMNLGRDILGIPTKKFRNEKQMDFADTMAVVPGRILDPPTLKYATRPEAPRNGSWNLVGKKFLKGASIESWVCVWIKAGGTRQKPEEITTGLGEFRAKAGEMGLVLRGIPAIVSFNLDGRDLFTEHQALFKLLDGVHKQSKRPDFALIVIPQGADRVFRYVKWQCDVRIGLANHCVLANKFTRTDAQYMANNALKVNLKFGGINHTLDTNSSGLLAAGKTMVVGIDATHPAPTDTDNFPTIAAIVASTDGGLGQWPGEIRIQSRRQEMMEHLTDMMLKRLHRWTLGGKKPLPDNILIYRDGVSEGQYNQVLVTEMTALRGAFAKVYKDRSHPRLTILVVTKRHHVRFFPTSAQDCDRTNNCKNGTLVERGITRPWYWDFYLQAQTPLQGSARPAHYVVLYDEIFTKNPSSPKGYNAADALQQLTHNICYMMARCTRAISYGTPAFLADRYCDRGRKYVLAYYEEREAMLKKSGKKKVNKSDIPVPEPHYIEVHHTLAETMVYI"
misc_feature 1234..1386 /locus_tag="N7532_011818" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1387..1827 /locus_tag="N7532_011818" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(1537..1539,1651..1653,1711..1713,1723..1725, 1774..1776,1795..1797,1801..1803) /locus_tag="N7532_011818" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_feature 1963..3291 /locus_tag="N7532_011818" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the...; Region: Piwi_ago-like; cd04657" /db_xref="CDD:240015" misc_feature order(2392..2394,2404..2406,2440..2451,2458..2460, 2482..2484,2491..2493,2503..2505,2515..2517) /locus_tag="N7532_011818" /note="5' RNA guide strand anchoring site [active]" /db_xref="CDD:240015" misc_feature order(2596..2598,2602..2604,2818..2820,3262..3264) /locus_tag="N7532_011818" /note="active site" /db_xref="CDD:240015" ORIGIN
atgcacaagccttatattctcgtgaaatccgagctcgccgagactcccatgaaaaatctggacttgcagaataagcgcgacaaacgtcgccgacgaccttgccgtaccaaccttttcccttacaccgactcacactcacactcacaatttgaccaatcgtcatgtcttctcgaggatccagctcacggggacgacgtgactcccaaggctcgcgacataacagcccgcccggcagccctcgccccggcagccctcattctgaccgaccacgaagcccgcacggctccggctcaggcgaacggtccccaagacacgggagccctagtggcgagcctcgacgaccccatggcagcccttccgggcagtcccagcgacccggctctcctggtcaatcgcagagattcggcacaagccctcctggacagtctcagcgacctagcccccctgggtcccaacgactcagtcctcccgggcagtctcagcgtggcgggcagcaacagatgcctcaccggcctcgtggtccaggcggacctcctgggcgaggtggccaaggtccgccaaacccccagcggagagccccggaggcgaaacaagagtaatgttatgttcacctcggatacacctgacgagggtatcgctttgttcgaagacaagtgtttgaactccaagcaagacatcaaacaagaggctcagctcgacttccgagaccaggacgtgaaagagaagaatccgctgcctccagtgaggctgcccattcgtcgccccatctatggaatgaagggaaagaagatcaacctccgcgctaattttttccccatccgtttcgggccctcggccgtcttctatgcctacaaggtgattttcgaacaaccaccaaacaccaagcgccacgttatccaggtcttcacgagcttggtgaagaacccggagttcgctcggtttggcccgccggtctcggatcttgctacgtggtttgtgaccactcggaagctcgatatccaggcgaaaagggtcggggtcgaccccggagacgacggagttcccaagcatgtgtatacagttcgattcaagctccagggcgacggccgcctgccgctggaggccgtgaccaggggcctgagcaacccggacgtccacatgaaagtcagcaatgaggactttgtgatccagatgctcaacatcatcgtgagtggctacgcattcaacgaccctggtgtggccatcaccgacaagagtcgttccaagtatttttacatcgacgatcgcgccgagaaatggaacctcggtggtggcctggaatgtcttcgaggcatcttttcaagcgtgcggcctggcccgagcaaattcatgctgaatctcaatgtcagcaacagtgccttctaccagcctcttccgatggacgaattctacaacgagttccttcggatgcgcaacgaagattatgatgcgctccaccggacccttcgaaatgtcaaggtgactgtcaagcaccttaagcccctgaaggatgataatggaaatcctgtgccccgcgtcaaaaacatctggggcctggcgactaccaaggacggggccccaattaaggacgaccaacaggggcgcctcactgccaaagtccccagtctggcagcggacccatacgacgtggaattctggtgtcaagctaaagatgatcgtggaaacccgacaggacccgggtggtatatctcggtggccaaatacttcaaagagcagtataacatcaccgcgcggaaagggctcccggtgctcaacgttggcaacaccgctcgtccgatctacatgcccatggatgtctgccgaatcatcaagggacagcaatacaacggcgatttgtcgacggcccagcggcaagagatcatcaaattcagctgccgccggccaccggacaaccacgagacgattatgaatctcggtcgcgatatcctgggcatccccaccaagaagttccgcaatgagaagcaaatggactttgcggacaccatggctgtcgtccccggaaggatcctagatcctcctaccctcaagtacgccactcgcccagaggctccgcggaacggatcgtggaacctcgtcggcaagaagttcctcaagggcgcgtcgattgaaagttgggtgtgcgtctggatcaaggccggcggcacgaggcaaaaacccgaagaaatcactacgggcttgggcgagttccgggctaaggcgggcgagatgggcctcgtgctcaggggtatcccggccatcgtctcctttaacctggatggccgcgatctcttcaccgaacaccaagcacttttcaagctgctcgatggggttcacaaacaatcgaagcgaccggactttgcccttatagtcatcccccagggcgcagacagggtcttccgatatgtcaagtggcagtgcgatgtgcggatcggtcttgcaaaccactgtgtcctggccaacaagttcacgaggactgacgctcagtacatggccaataacgctttgaaggtcaatttgaagttcggcggcatcaatcatacactcgataccaattcatcgggcctgctggctgctggaaagaccatggtggtgggaatcgacgcgacgcatcctgccccgactgatacggataatttcccgaccatcgcagccattgtggccagcactgatggaggactcggacaatggcccggtgaaatccgcatccaatcccgccgccaggagatgatggaacatctgacggacatgatgctgaagcgcctccatcgctggaccttgggtggcaaaaaacctctccctgataatatcctgatctaccgtgatggggtgagcgagggtcaatataatcaagtcttggtgactgagatgaccgccctcagaggtgcttttgcaaaagtctacaaggaccgatcacacccgagactcaccattctggtggtcaccaaacgccatcatgtccggtttttccctacctctgcacaagattgcgatcggacaaataactgtaaaaatggcacactggtcgagcgcggcatcacccgtccgtggtattgggatttctatctccaggctcagactccgctgcagggttcggctcgtccagcccattatgtggtgctttacgacgagattttcacgaagaatccttcgtcgcccaaaggttacaacgctgccgatgctcttcagcaactgacacacaacatctgctacatgatggcgcgttgcacccgtgcaatcagttacgggacacccgcgtttttggcagatcggtactgtgatcgtggtcgcaagtatgtgcttgcgtattacgaggaaagagaagctatgctgaagaagagtgggaagaagaaggtgaacaagtctgatattcccgtgcctgaacctcattacattgaggttcatcatactcttgcggagactatggtctacatctag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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