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Previous release (v1)
2026-10-06 01:32:19, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_056171395 1371 bp mRNA linear PLN 19-MAY-2023
DEFINITION Trichoderma breve HNH endonuclease domain-containing protein
(T069G_04185), partial mRNA.
ACCESSION XM_056171395
VERSION XM_056171395.1
DBLINK BioProject: PRJNA973574
BioSample: SAMN30971524
KEYWORDS RefSeq.
SOURCE Trichoderma breve
ORGANISM Trichoderma breve
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae;
Trichoderma.
REFERENCE 1 (bases 1 to 1371)
AUTHORS Lin,R. and Liu,T.
TITLE Chromosome-level assembly of Trichoderma breve T069, a fungus used
in development of biopesticide product
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1371)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (18-MAY-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1371)
AUTHORS Lin,R. and Liu,T.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-2022) School of Plant Protection, Hainan
University, No 58, Renmin Avenue, Haikou, Hainan 570228, China
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NC_079233).
COMPLETENESS: incomplete on both ends.
FEATURES Location/Qualifiers
source 1..1371
/organism="Trichoderma breve"
/mol_type="mRNA"
/strain="T069"
/isolation_source="soil"
/db_xref="taxon:2034170"
/chromosome="2"
gene <1..>1371
/locus_tag="T069G_04185"
/db_xref="GeneID:80866083"
CDS 1..1371
/locus_tag="T069G_04185"
/codon_start=1
/product="HNH endonuclease domain-containing protein"
/protein_id="XP_056032287.1"
/db_xref="GeneID:80866083"
/translation="
MDSPPPEDNILELMSNLDKTQLEKLWKLRKLTSLNEDQVQELQRLHYLYELGFLIDLAKKAPDGIHNLVCDRLDTQPVDDYVTDFEIRRGIFYRITRVACWSARGGINAALFAVLMVAPVHVLQSKLAALEDSYYDRKNQTEVDEMLSQWQITSVNGIQAFVNKGGSQKGVSAAAPLMANSQPIILQPAPTAQSPNHTQMSEAVKLCKRRDNNICCFTSMSDAHEAYIFPVDGTENTTMITDMLEMFWDADTVTQLVPLIKDRNIIESPQNLISMNGLLHTWFDDCKMALKPIGETENGVVVQFHWLREGNYKPNSVEADFGTFTTQSGINQESDNPAHRPNFQLLKMSWDLRRVAAICGAAVGEPWEESDDEKYMDYYSEDETCSSVSEENNYPEVLRWREEVEGGIEIETDVMIETDVMIETDVKAETDVDIETDVEMETDEDGQPGDDFKEPF"
misc_feature 643..870
/locus_tag="T069G_04185"
/note="HNH nucleases; HNH endonuclease signature which is
found in viral, prokaryotic, and eukaryotic proteins. The
alignment includes members of the large group of homing
endonucleases, yeast intron 1 protein, MutS, as well as
bacterial colicins, pyocins, and...; Region: HNHc;
cl00083"
/db_xref="CDD:469607"
ORIGIN
atggattccccgccgcctgaggataacatacttgagctaatgtcaaatctcgacaagacccaattggagaagctttggaagctacgtaagttgacgagtcttaacgaggaccaagtacaggagctgcagaggctgcactacctctacgaactcggatttctcatcgacctagccaagaaagcacctgacggcatccataatctggtatgcgacagactcgacacacagcccgttgatgattatgtgactgatttcgagatccggcgcggcattttttaccgaatcacacgtgttgcgtgctggtcggcacgcggcgggattaatgcagcgctatttgcagtcctcatggtggccccggtgcatgttttacagtcgaaacttgctgcgttggaggatagctactatgatcgcaaaaaccagactgaagtcgatgagatgctttctcaatggcaaatcacgagtgtaaacggcatccaagcatttgttaataaaggaggctctcaaaaaggagtgtcagcggcggcaccattgatggcaaatagtcaaccgatcattcttcaaccagcgccgactgctcaatcaccaaatcatacgcaaatgtccgaggcagtgaagctttgcaagcgacgagacaacaatatatgctgtttcaccagcatgtccgacgcacacgaagcttatattttccccgtcgacggaacggaaaatacaactatgataacggatatgctcgagatgttttgggacgcagatacagtgacgcaactcgttccattgatcaaggaccgtaatattatagaatctcctcaaaacctaatctccatgaatggcctacttcatacctggttcgatgactgcaaaatggcgctcaaaccaataggagagacagaaaatggcgttgtcgttcaatttcactggcttagggagggcaattacaagcccaactctgtcgaagcggatttcggcactttcacgacgcaaagtggcattaatcaagagtcggataatccggctcatagacctaatttccagctcctcaagatgtcatgggatctccgtcgtgttgctgcaatatgtggcgctgcagttggagaaccctgggaggagtcggatgatgagaaatacatggattactatagcgaggacgagacttgttcatctgtttcagaagagaacaactatcctgaggtgttgcggtggagggaagaggttgagggtgggatcgagattgaaactgatgtcatgattgaaactgatgtcatgattgaaactgatgtcaaggctgaaactgatgttgacattgaaactgatgtcgagatggagacggacgaagatggacagcccggtgatgattttaaagagcctttttag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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