LOCUS       XM_055103724            3821 bp    mRNA    linear   PRI 06-MAR-2024
DEFINITION  PREDICTED: Pan paniscus retina and anterior neural fold homeobox 2
            (RAX2), transcript variant X1, mRNA.
ACCESSION   XM_055103724
VERSION     XM_055103724.2
DBLINK      BioProject: PRJNA950461
KEYWORDS    RefSeq.
SOURCE      Pan paniscus (pygmy chimpanzee)
  ORGANISM  Pan paniscus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Pan.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_073269) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Mar 6, 2024 this sequence version replaced XM_055103724.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_029289425.2-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/27/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3821
                     /organism="Pan paniscus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9597"
                     /chromosome="20"
                     /sex="male"
                     /cell_line="PR00251"
                     /cell_type="fibroblast"
                     /dev_stage="adult"
     gene            1..3821
                     /gene="RAX2"
                     /note="retina and anterior neural fold homeobox 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 5 Proteins"
                     /db_xref="GeneID:100975671"
     CDS             876..1568
                     /gene="RAX2"
                     /codon_start=1
                     /product="retina and anterior neural fold homeobox protein
                     2 isoform X1"
                     /protein_id="XP_054959699.2"
                     /db_xref="GeneID:100975671"
                     /translation="

MPAPVEGTDFPGAGRQAWGSPALSLPVAPPAVSPPSVPLPSHQVGAMFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA"

     misc_feature    1095..1265
                     /gene="RAX2"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      

ccggctgtgaatggtgaacttctattcatacctcaagacccagctaaaagggtccctaccccttgtgtccagaggagccaactgcagtgccttcacctctggacctcagcttccccaactgcctctgacatctgtgagttctaagacacctttttctgcccccagcagataaaaatattaacagtgggcattcattaagtgccccctgtatgccaatttctgtgcgatgctctgagaagctgaaatccccccagggtaggtcctagtgtggcagttttacagccagggaaactgaggcccagagagggagaggcccttgccgtcttatggcaaggggccgtggagcctgtaagactatccccccagccacccacttagagccccagccctccatccaccctgccctccctcctggctcagaacagcccaggaccaagtgggaggggccgcctcaattaatcaccttgagctaatcctcccccacgcacccccgacctggctcggctccggcagggccaggccacagcagacacagcaccgggcccgctggggcaggtgtcccgtggaaatcgacggaggggctgccgtgggcggtgagtgcggggtgggcaccggtgggcctgggtaggaggtggtgggggcagagatccccccagggtggagggcttagggcgtgagaagggatcctgccttccttgacgggggggcatccttgaccccccccgccgacacacacacacacaggccgtgacagtcacagagagggaaagagaaaacagggacggtgacacacacagagagaaggaagagcagacagaggcacagcaggagactccccccaagcccgaggaggacagcctggggatgcagagcgcatgccggccccagtggagggaacagatttccccggagccgggaggcaagcctggggctcccctgccctgtccctgccggtagcccccccagccgtctccccgccatctgtcccgctgccgtcccaccaggtgggagccatgttcctgagcccgggcgaggggccggcaaccgagggtgggggtctggggccgggcgaggaggcccccaagaagaagcaccggaggaaccgcaccaccttcaccacctaccagctgcaccagctggagcgggcgttcgaggcctctcactacccggatgtgtacagccgtgaggagctggcagccaaggtgcacctacctgaggtgcgcgtgcaggtgtggttccagaaccgccgggccaagtggcgccgccaggagcggctggagtcaggctcgggtgccgtggcagctccgagactccccgaggccccagcgctgccgttcgcccgccccccggccatgtcgctgcccctggagccctggttgggccctggaccgccggccgtgccaggcctcccccgcctcctgggcccgggcccggggctgcaagcgtccttcgggcctcatgcctttgctcccaccttcgcagatggcttcgccctggaggaggcgtccctgcggctgctggccaaggaacacgcacaggctctggacagggcctggccgccagcctgagcctgccgccctcccgggccccctcctcggcccaacccgagaaccagggacgtgccctggtgacagccaccatgccttggcctaggccaaggtcatggagcaactgtggtcaagccaggccaccaccactggggagcgggaccagagagacaggctgctgggttccctgcccccatcccgtctcccaccccatcgccacccgtcctgctggcagcggactggcccccagtgtcaggcaggaggtgacccaagtattctcaggccaggtgcggggacctcctcccctcctggggcctcagtctcctgtctgttaattgggcgtgggggcctccgaggttcgagggctgcgaggctgtgggtggcgggaccgctgactctgtaagatgagtgtaaatctctctgcttctcctaatccccatcagcagagctgcccactctccaggctcccagtcccctggaaataacaaatagcagcagctcccgcgagcctggtctcctctcaccgtgtgctcgccatgtgagcgctcccctctccgttgtgccctggacctcgggcacagctgtcagcccattctacagagagggaaaccggggcttaggcaggaagccaggtccccaaagtcgcacggccaggagtggatggagctgcctttcagacccatcaccggtcctaccgtccggggcacagcgacaggttctggagagagggtgggtcccgggccaggtgctggtgggcctccaggtggaggcgggctgatgctgggtgtgtcgtcatcgtcagcccgttcctcacgtccccacagaccccaggccctgtgcatgtccccagtggaggcatggccagcatctgctctgtccaacccagtcgcatcgctcaagagctctgagcaaggaggctgtcgcggggccgagaacccgctgggactggcaagcacggctggcccagtgcagcaggagggggccctgagccatgggatgggacagtctgggccagcgccaccttccgagacagaagtgcggcaccagggcaggagctgcagtagctaccctccccgtctccagcctgggctccccagatcactcccagatcaccagggcaccccatctctaggcggcacctcacacaccagtcctgtggtccaacgcccagccatcacccaatgtcaccgcacaccaggcagtggggacgcggcagtaagcacaagaaagattttttttttttaaagctaaaccaggccaggtgcggtggctcatgcctgtaatcccagtgctttgggaggctgaggtgggaggattgcttgagacctgcctgggtgacacagcaagaccccatctccacaaacgtttttaaaatgtgccgggtgtagtggtgcacacctgtcatcccagctacccaagaagctgaggcaagaggatcacttgagcccagaaggttgaggctgcagggagctgtgatcacaccgctgcactccagcctgtgcaacagagccagaccctgactcaaaacaaataaaaaacaaatctaaaacaaaagacttcagacagtgataagtgatagggagaaaaaaaacccaggaaagtcagatgtggagtgtggcaggggctgcaattttaatagggagttctggaggaggggaggctggcgtgaaggtagagaccgggggcgggagggagaaggtctaggggaggagggagctgggcagaggcacaggctgtgcaaaggccctggggcaggaccacgcctagtgcattgaaagaatagcgaggaggcccatgcggaggcccatgcggctggagcagagtgaggagggggaggagggaggtgatggggaggccaggcagggccagtggctgttataactttgatttttaccctcagaaccttggggaacaacaggagggtgggaacggctggcaccacctgcggtgagcgcgagagaaggcgcgctcacacccctgcctgcccagggaggccgccggggacagcaggtgcgcagtaatccgctccgctccagagtcccctaagaggatgaaggttacggtttccctgagacgggccccgccccgcccatccagcttgtggacagaggaagccggagggtgggtgagcccagtccaaatcccccagggcacccacctaggcatgggtggggctgctgtggcaagggtggggccgagggcatgacccttgggggttctgcaggacgtggggtccatgaggtgatctacccccagcaagaggccccatcactc

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