LOCUS       XM_055103724            6110 bp    mRNA    linear   PRI 11-JUN-2023
DEFINITION  PREDICTED: Pan paniscus retina and anterior neural fold homeobox 2
            (RAX2), mRNA.
ACCESSION   XM_055103724
VERSION     XM_055103724.1
DBLINK      BioProject: PRJNA950461
KEYWORDS    RefSeq.
SOURCE      Pan paniscus (pygmy chimpanzee)
  ORGANISM  Pan paniscus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Pan.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_073268) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_029289425.1-RS_2023_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/31/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6110
                     /organism="Pan paniscus"
                     /mol_type="mRNA"
                     /db_xref="taxon:9597"
                     /chromosome="19"
                     /sex="male"
                     /cell_line="PR00251"
                     /cell_type="fibroblast"
                     /dev_stage="adult"
     gene            1..6110
                     /gene="RAX2"
                     /note="retina and anterior neural fold homeobox 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 5 Proteins"
                     /db_xref="GeneID:100975671"
     CDS             2645..3199
                     /gene="RAX2"
                     /codon_start=1
                     /product="retina and anterior neural fold homeobox protein
                     2"
                     /protein_id="XP_054959699.1"
                     /db_xref="GeneID:100975671"
                     /translation="

MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFALEEASLRLLAKEHAQALDRAWPPA"

     misc_feature    order(2726..2740,2744..2746,2795..2797,2813..2815,
                     2852..2854,2858..2863,2870..2875,2879..2887,2891..2896)
                     /gene="RAX2"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(2732..2734,2741..2743,2861..2863,2870..2875,
                     2882..2884)
                     /gene="RAX2"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    2735..2893
                     /gene="RAX2"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
ORIGIN      

agtaccctctcctttccatatctagggcactcccctgcctgagccccctggctccttggacttggggggcactggtctctggggcttcccctggagcccgctccacctctcaggcctctgcctctgaaacagtcccacctcgcagcccagaatgggcctgggcaacgcccttgcacctccatacccacaccctgcccctctccagcttccttcctctggaattgctacccccacccttctgtcctccccatccccccagcccttggcctgaccagaccctgtagcctcacctgcctggcacctgcctctggtttctcagctgctcatcattgatgtttgtataaaatgccactgtgtccctgctccacaacctcccatggttccccagcactccatccttcacaccccatgtgtccagaacttgcggctttgcactccatcttccattctcaccaccttccttaacatagcaacccgactggtcgcggtggctcacgcctggaactcctgcactatgggaggccgaggcaagcggatcacctgaggtcaggagttcaagaccaacctggccaacacggcgaaaccccatcttcagtaaaaatacaaaaattagctgggcgtggtggcgcacctgtaatccgagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccgagatctcaccactgcactccagcctaggcaacagagtgagactccctctcaaaaaaacaaaaataggccaggcggggtggctcacgcctgtaatgccagcactttgggaggccaaggcaggcggatcacgaggtcaggagttcaagaccagcctggccaaggtggcaaaaccgtgtctctactaaaaaatacaaaaattagccaggcgtggttgcaggtgtctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctaggaggcggaggttgcagtgagctgagatcgtgccactgcactccagcctgggcgacagagtaggactctgtctcaaaaaaaaacccaaaaactaaatgaaatatcaacccaccttgcccccacaggcccccctccgtgggttttctccctaggctcgtggccactggccacgatctgcattttaacacagtggttggttgtctgtctgccctgctagaaagtcagccccgtgacttctgtctgttgtggtcactactgctgtgagcagtacctggtagacagtaagtgctcaataaatgtttattgaatggtgaacttctgtttttcttttttgttggtggtggttttggttttttgttttttgttttttttttttgagatggagtttcactctgttgcccaggctggagtgcaatggcatgaccttggctcactgcaagctccaccccaccaggttcaagcaattctcctgcctcagcctcccaagtagctgggatttataggcacccaccaccacgcccggctaatttttgtatttttagtagacagggttttgccatgttggccaggctggtctcaaactcatgatctcaggtgatccgcccgcctcagcctcccaaagtgctggggttacaggcgtgagccactgcgcccggctgtgaatggtgaacttctattcatacctcaagacccagctaaaagggtccctaccccttgtgtccagaggagccaactgcagtgccttcacctctagacctcagcttccccaactgcctctgacatctgtgagttctaagacacctttttctgcccccagcagataaaaatattaacagtgggcattcattaagtgccccctgtatgccaatttctgtgcgatgctctgagaagctgaaatccccccagggtaggtcctagtgtggcagttttacagccagggaaactgaggcccagagagggagaggcccttgccgtcttatggcaaggggccgtggagcctgtaagactatccccccagccacccacttagagccccagccctccatccaccctgccctccctcctggctcagaacagcccaggaccaagtgggaggggccgcctcaattaatcaccttgagctaatcctcccccacgcacccccgacctggctcggctccggcagggccaggccacagcagacacagcaccgggcccgctggggcaggtgtcccgtggaaatcgacggaggggctgccgtgggcggtgagtgcggggtgggcaccggtgggcctgggtaggaggtggtgggggcagagatccccccagggtggagggcttagggcgtgagaagggatcctgccttccttgacgggggggcatccttgaccccccccgccgacacacacacacacaggccgtgacagtcacagagaagggaagagaaaacagggacggtgacacacacagagagaaggaagagcagacagaggcacagcaggagactccccccaagcccgaggaggacagcctggggatgcagagcgcatgccggccccagtggagggaacagatttccccggagccgggaggcaagcctggggctcccctgccctgtccctgccggtagccccccccagccgtctccccgccatctgtcccgctgccgtcccaccaggtgggagccatgttcctgagcccgggcgaggggccggcaaccgagggtgggggtctggggccgggcgaggaggcccccaagaagaagcaccggaggaaccgcaccaccttcaccacctaccagctgcaccagctggagcgggcgttcgaggcctctcactacccggatgtgtacagccgtgaggagctggcagccaaggtgcacctacctgaggtgcgcgtgcaggtgtggttccagaaccgccgggccaagtggcgccgccaggagcggctggagtcaggctcgggtgccgtggcagctccgagactccccgaggccccagcgctgccgttcgcccgccccccggccatgtcgctgcccctggagccctggttgggccctggaccgccggccgtgccaggcctcccccgcctcctgggcccgggcccggggctgcaagcgtccttcgggcctcatgcctttgctcccaccttcgcagatggcttcgccctggaggaggcgtccctgcggctgctggccaaggaacacgcacaggctctggacagggcctggccgccagcctgagcctgccgccctcccgggccccctcctcggcccaacccgagaaccagggacgtgccctggtgacagccaccatgccttggcctaggccgaggtcatggagcaactgtggtcaagccaggccaccaccactggggagcgggaccagagagacaggctgctgggttccctgcccccatcccgtctcccaccccatcgccacccgtcctgctggcagcggactggcccccagtgtcaggcaggaggtgacccaagtattctcaggccaggtgcggggacctcctcccctcctggggcctcagtctcctgtctgttaattgggcgtgggggcctccgaggttcgagggctgcgaggctgtgggtggcgggaccgctgactctgtaagatgagtgtaaatctctctgcttctcctaatccccatcagcagagctgcccactctccaggctcccagtcccctggaaataacaaatagcagcagctcccgcgagcctggtctcctctcaccgtgtgctcgccatgtgagcgctcccctctccgttgtgccctggacctcgggcacagctgtcagcccattctacagagagggaaaccggggcttaggcaggaagccaggtccccaaagtcacacggccaggagtggatggagctgcctttcagacccatcaccggtcctaccgtccggggcacagcgacaggttctggagagagggtgggtcccgggccaggtgctggtgggcctccaggtggaggcgggctgatgctgggtgtgtcgtcatcgtcagcccgttcctcacgtccccacagaccccaggccctgtgcatgtccccagtggaggcatggccagcatctgctctgtccaacccagtcgcatcgctcaagagctctgagcaaggaggctgtcgcggggccgagaacccgctgggactggcaagcacggctggcccagtgcagcaggagggggccctgagccatgggatgggacagtctgggccagcgccaccttccgagacagaagtgcggcaccagggcaggagctgcagtagctaccctccccgtctccagcctgggctccccagatcactcccagatcaccagggcaccccatctctaggcggcacctcacacaccagtcctgtggtccaacgcccagccatcacccaatgtcaccgcacaccaggcagtggggacgcggcagtaagcacaagaaagatttttttttttaaagctaaaccaggccaggtgcggtggctcatgcctgtaatcccagtgctttgggaggctgaggtgggaggattgcttgagacctgcctgggtgacacagcaagaccccatctccacaaacgtttttaaaatgtgccgggtgtagtggtgcacacctgtcatcccagctacccaagaagctgaggcaagaggatcacttgagcccagaaggttgaggctgcagggagctgtgatcacaccgctgcactccagcctgtgcaacagagccagaccctgactcaaaacaaataaaaaacaaatctaaaacaaaagacttcagacagtgataagtgatagggagaaaaaaaaacccaggaaagtcagatgtggagtgtggcaggggctgcaattttaatagggagttctggaggaggggaggctggcgtgaaggtagagaccgggggcgggagggagaaggtctaggggaggagggagctgggcagaggcacaggctgtgcaaaggccctggggcaggaccacgcctagtgcattgaaagaatagcgaggaggcccatgcggaggcccatgcggctggagcagagtgaggagggggaggagggaggtgatggggaggccaggcagggccagtggctgttataactttgatttttaccctcagaaccttggggaacaacaggagggtgggaacggctggcaccacctgcggtgagcgcgagagaaggcgcgctcacacccctgcctgcccagggaggtcgccggggacagcaggtgcgcagtaatccgctccgctccagagtcccctaagaggatgaaggttacggtttccctgagacgggccccgccccgcccatccagcttgtggacagaggaagccggagggtgggtgagcccagtccaaatcccccagggcacccacctaggcatgggtggggctgctgtggcaagggtggggccgagggcatgacccttgggggttctgcaggacgtggggtccatgaggtgatctacccccagcaagaggccccatcactccctaactacgtgtcaccctcagcctcctccaatctggtggactccagccctcgcgatcccgcccatcacagccaggcagggcaggagttgttgggactgcagggaggccagtcctcggtcagaccctgggtcagggtcagggtgccgaaagccgactccagagggtggactgggggcggaggttgagacctgggctccagtggagtggacagaggacttggggggtggggaaggaaggcccaagcccctgggctccagggataggccagtgaggaccacgctgtgactgcggcaggaaggaaggggcagtcccttccctctgattctacttgctgcgctggtggggacgtcggccaggagccctcgggctaccctgcccatgagtgccagcccctgggggatccaaggaccctgagatggagagagccttgggtctgaataccgaagcacctggatccagccacacctgaagccacaccactacccgctccggacatctcctttcttgaagctcataaagcctcttttctgactctgatggcttgagttaggtttgagtcccttgcaaccaagagtggcttagctaggacaaccccctcacccagcaacttgagatttggggccggggcctcgtgagcagtgtcaggaattccaggag

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