2025-04-03 20:18:59, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_054722862 1945 bp mRNA linear MAM 31-MAR-2023 DEFINITION PREDICTED: Eptesicus fuscus nuclear envelope integral membrane protein 2 (NEMP2), mRNA. ACCESSION XM_054722862 VERSION XM_054722862.1 DBLINK BioProject: PRJNA948460 KEYWORDS RefSeq; includes ab initio. SOURCE Eptesicus fuscus (big brown bat) ORGANISM Eptesicus fuscus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_072483) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_027574615.1-RS_2023_03 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 03/28/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 36% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..1945 /organism="Eptesicus fuscus" /mol_type="mRNA" /isolate="TK198812" /db_xref="taxon:29078" /chromosome="11" /sex="male" /tissue_type="liver" /dev_stage="adult" /geo_loc_name="USA: Silver Falls Park - Crosbyton, TX" /collection_date="2020-07-16" /collected_by="David Ray" gene 1..1945 /gene="NEMP2" /note="nuclear envelope integral membrane protein 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:103290640" CDS 23..1945 /gene="NEMP2" /codon_start=1 /product="nuclear envelope integral membrane protein 2" /protein_id="XP_054578837.1" /db_xref="GeneID:103290640" /translation="
MRVRAGPWWLLPWALLAAGAGRAKEPLGAPLAVSVPRCRALKEMDVIETSASDCYCYHQNPQTEWKYIWSTVQVKVASADPLSLVYITDRHGCRDPETVLAAIECAVHALWTLRESHEIAVNIRPHEGTVCFSVRPAGRHSVHVTRSAVDLRLVLLFVAGIALLRSAARLSRSPAFYYCSGTALGVLMTPVFLLLLARRSIPKYSTFGAVMVGCWFASVYVVCQGMEHLPWLWCEHRMYVVGYVLAVGSLSFAACYRRGPLAEERSRRLLAWTLRLLGLALTRCGAPVPGAAWAAAGLLLLPRALRCPARALRNVKKWLRSRRPAFRYLTEEEYQEQADAATARALEELRQACRRPDFPSWLAVSRLQAPRKFADFVLGGSHLSPEEMRLHEEQYSLGGTFLEEQPFHLGRGQPPEACRSGGGIGASAGAGRPARRVETGPACSRHIETGPACSRRVETDLECSRHIETGLECSRHIETDLECSRHIETGPACSRHIETGPECSRHIETDLECSRHIETDPACSRHIETDLECSRHIETGPACSRHIETGPECSRHIETDLECSRHIETDLECSRHIETDPECSRHIETDPECSRHIETGPECSRHIETGPACSSASTCCSGRGSQVSSLHAECSRTARP"
misc_feature 443..1177 /gene="NEMP2" /note="NEMP family; Region: NEMP; pfam10225" /db_xref="CDD:463008" ORIGIN
gagggacggaggggccggcgggatgcgggtgcgcgcgggcccgtggtggctgctgccctgggcgctgctggccgcgggcgcggggcgcgcgaaggagccgctcggggcgccgctggcagtttcagttccgaggtgcagagctttgaaggaaatggatgtaattgaaacttctgcgtcagactgttactgctaccatcagaacccccaaaccgagtggaaatacatatggtcaacggtgcaggtgaaggtcgccagtgccgacccgctcagcctggtgtacatcacggacagacacggctgcagggaccccgagacggtgctcgctgccatcgagtgcgcggtccacgcgctctggaccctgcgcgagtctcacgaaatagccgtgaacatccgtccacacgaggggaccgtgtgcttctccgtgaggccggccggcaggcactcggtgcacgtgacgcgcagcgccgtggatctcaggctcgtcctcctgtttgtggccggcatcgccctcttgcgctccgcggcgcgcctgagtcgaagccctgctttctattactgctcggggacggcgctgggcgtgctgatgactccggtcttcctgctgctgctggcgagaaggtccatccccaagtatagcacctttggggcagtcatggttggttgttggtttgcctcggtgtatgtggtgtgccaggggatggagcacctgccgtggctgtggtgtgagcacaggatgtatgtcgtaggctatgtcctggcagtggggtccctcagcttcgctgcctgttacagacgcgggcccctggccgaggagaggagccggcgcctcctggcgtggacgctgcggctgctgggcctggcgctgacccgctgcggcgcccccgtgcccggggccgcctgggccgccgccggcctcctgctgctgccccgggctctgcgctgcccggcgagagctctcaggaacgtgaagaagtggctgaggtcccggaggccggcgttcaggtacctgaccgaggaggagtaccaggagcaggccgacgccgcgaccgcccgggccctggaggagctgcgccaggcctgccgccggcccgacttcccgtcctggctggccgtgtcccggctccaggcgccgagaaagttcgcggacttcgtcctcggaggaagccacttgtcgccggaagaaatgcgtctccatgaagagcagtacagcctggggggcaccttcctggaggagcagccctttcacctggggcgggggcagccgcctgaagcctgtcggtccggaggcggcattggtgccagcgcaggtgctgggagaccggcccggcgtgtagagaccggcccggcgtgctcccggcacatagagaccggcccggcgtgctcccggcgtgtagagaccgacctggagtgctcccggcacatagagaccggcctggagtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccggcccggcgtgctcccggcacatagagaccggcccggagtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccgacccggcgtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccggcccggcgtgctcccggcacatagagaccggcccggagtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccgacccggagtgctcccggcacatagagaccgacccggagtgctcccggcacatagagaccggcccggagtgctcccggcacatagagaccggcccggcgtgctccagtgcgtccacgtgctgctcaggaaggggctctcaggtcagctcgctccacgccgagtgcagcaggactgctcggccgtga
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@meso_cacase at
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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