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Previous release (v1)
2025-12-08 04:08:10, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_054428072 1063 bp mRNA linear INV 21-MAR-2023
DEFINITION PREDICTED: Macrosteles quadrilineatus cofilin/actin-depolymerizing
factor homolog (LOC129000966), transcript variant X2, mRNA.
ACCESSION XM_054428072
VERSION XM_054428072.1
DBLINK BioProject: PRJNA944995
KEYWORDS RefSeq.
SOURCE Macrosteles quadrilineatus (aster leafhopper)
ORGANISM Macrosteles quadrilineatus
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Paraneoptera; Hemiptera; Auchenorrhyncha;
Membracoidea; Cicadellidae; Deltocephalinae; Macrosteles.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_026542601) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_028750875.1-RS_2023_03
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 03/16/2023
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1063
/organism="Macrosteles quadrilineatus"
/mol_type="mRNA"
/isolate="MER2022"
/isolation_source="Lab-reared"
/db_xref="taxon:74068"
/chromosome="Unknown"
/sex="pooled male and female"
/tissue_type="Whole body"
/geo_loc_name="USA: California, Merced"
/collection_date="2022-08-16"
gene 1..1063
/gene="LOC129000966"
/note="cofilin/actin-depolymerizing factor homolog;
Derived by automated computational analysis using gene
prediction method: Gnomon. Supporting evidence includes
similarity to: 25 Proteins"
/db_xref="GeneID:129000966"
CDS 265..711
/gene="LOC129000966"
/codon_start=1
/product="cofilin/actin-depolymerizing factor homolog
isoform X2"
/protein_id="XP_054284047.1"
/db_xref="GeneID:129000966"
/translation="
MASGVTVSDVCKTTYEEIKKDKKHRYVVFFIKDEKQIDVEYIGDRNAQYDQFLEDLQKAGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASQEAVEEKLRATDRQ"
misc_feature 271..690
/gene="LOC129000966"
/note="Cofilin, Destrin, and related actin depolymerizing
factors; Region: ADF_cofilin_like; cd11286"
/db_xref="CDD:200442"
misc_feature 271..276
/gene="LOC129000966"
/note="putative G-actin interface [polypeptide binding];
other site"
/db_xref="CDD:200442"
misc_feature order(520..522,526..528,568..570,649..651,658..660)
/gene="LOC129000966"
/note="putative F-actin interface [polypeptide binding];
other site"
/db_xref="CDD:200442"
polyA_site 1063
/gene="LOC129000966"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
gacgcattcagtgattaactcgataacattggacaagaagagattgtggttaggaggggacgataggccgcccaattgcgtgagtcgtactattaggagctgtctgtgcggatggatttttaacgagagagtcattttactctgttcggttggtagtggaagcagtgaacagtgaacaccctctcttccactggatattgggtgacgttagggtttctagtgaaatagactggcacaaggtgatacggatatcgcacaaataaaatggcttccggtgtgacggtatcggatgtgtgtaaaacaacatatgaagagatcaaaaaggataaaaaacatcgatatgtagtattttttatcaaggatgagaaacaaattgacgttgaatacataggtgatcgcaatgcgcaatacgaccaattcctggaggatctgcagaaggcagggactggtgaatgtcggtacggactgtttgactttgagtacacacaccagtgccaaggcacatctgaggcgtccaagaaacagaagcttttcctgatgtcctggtgccccgacactgccaaagtcaagaagaagatgttgtactcctcctcttttgatgccctcaagaagtccttggttggtgttcagaagtacatccaggccacagacctgtcggaagcgtcccaggaggctgtggaagagaagctgcgtgccaccgaccgacagtaggccacctcagctctaggaaaaataacaccagagtcgaccacccgacaagcatttatttatttatatttattagcaaaatttgacgatcgaaacgatcgttcgagtcgactagtcaagagagctcggataccgaagtaccgtatgaaggttgacaactgtgtgatttgtgcttgctcgtgctccttataatgttactcttaccgctattatttttcctagaccgattttgtactgatctataaagaaacaaattaaaacaaaattacaattataatgttgtgtagatgtattttcatttttgatcaaggctggatatatgctatatatataatataattcttttcatttctaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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