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Previous release (v1)
2026-09-24 09:38:47, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_053805000 2769 bp mRNA linear INV 24-FEB-2023 DEFINITION PREDICTED: Anopheles marshallii protein argonaute-2 (LOC128709962), transcript variant X2, mRNA. ACCESSION XM_053805000 VERSION XM_053805000.1 DBLINK BioProject: PRJNA935337 KEYWORDS RefSeq. SOURCE Anopheles marshallii ORGANISM Anopheles marshallii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_071326) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_943734725.1-RS_2023_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/15/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2769 /organism="Anopheles marshallii" /mol_type="mRNA" /db_xref="taxon:1521116" /chromosome="2" gene 1..2769 /gene="LOC128709962" /note="protein argonaute-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77 Proteins" /db_xref="GeneID:128709962" CDS 1..2769 /gene="LOC128709962" /codon_start=1 /product="protein argonaute-2 isoform X2" /protein_id="XP_053660975.1" /db_xref="GeneID:128709962" /translation="
MYPVGQQSPWTSSPPRPPSPSQSQTSFDTLSPPPAGATVNPTTVATTTGTQGAQALGVVPATPPAPPDLPVFTCPRRPNLGREGRPIVLRANHFQITMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKMFGALKPVFDGRNNLYTRDLLPIGNDRVELEVTLPGEGKDRVFRVTIKWVAQVSLFNLEEALEGRTRQIPYDAILALDVVMRHLPSMTYTPVGRSFFSSPDGYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRDINEQRKPLTDSQRVKFTKEIKGLKIEITHCGTMRRKYRVCNVTRRPAQMQSFPLQLENGQTVECTVAKYFLDKYKMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDREREINNLVRRADFNNDAYVQEFGLTISNNMMEVRGRVLPPPKLQYGGRVSSMSGQLLSGPQNKVSLALPNQGVWDMRGKQFFTGVEIRVWAIACFAPQRTVREDALRNFTQQLQKISNDAGMPIIGQPCFCKYATGPDQVEPMFRYLKSTFSHLQLVVVVLPGKTPVYAEVKRVGDTVLGMATQCVQAKNVNKTSPQTLSNLCLKINVKLGGINSILVPSIRPKVFDEPVIFLGADVTHPPAGDNKKPSIAAVVGSMDAHPSRYAATVRVQQHRQEIIQELSSMVRELLIMFYKSTGGFKPHRIILYRDGVSEGQFPHVLQHELTAIREACIKLEADYKPGITFIVVQKRHHTRLFCADKKEQSGKSGNIPAGTTVDVGITHPTEFDFYLCSHQGIQGTSRPSHYHVLWDDNHFESDELQCLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSHQSGCSEDRTPGAMARAITVHADTKKVMYFA"
misc_feature 253..642
/gene="LOC128709962"
/note="N-terminal domain of argonaute; Region: ArgoN;
pfam16486"
/db_xref="CDD:465134"
misc_feature 670..822
/gene="LOC128709962"
/note="Argonaute linker 1 domain; Region: ArgoL1;
pfam08699"
/db_xref="CDD:462567"
misc_feature 823..1185
/gene="LOC128709962"
/note="PAZ domain, argonaute_like subfamily. Argonaute is
part of the RNA-induced silencing complex (RISC), and is
an endonuclease that plays a key role in the RNA
interference pathway. The PAZ domain has been named after
the proteins Piwi,Argonaut, and Zwille; Region:
PAZ_argonaute_like; cd02846"
/db_xref="CDD:239212"
misc_feature order(979..981,1024..1026,1066..1068,1078..1080,
1132..1134,1153..1155,1159..1161)
/gene="LOC128709962"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239212"
misc_feature 1321..2640
/gene="LOC128709962"
/note="PIWI domain, Argonaute-like subfamily. Argonaute is
the central component of the RNA-induced silencing complex
(RISC) and related complexes. The PIWI domain is the
C-terminal portion of Argonaute and consists of two
subdomains, one of which provides the...; Region:
Piwi_ago-like; cd04657"
/db_xref="CDD:240015"
misc_feature order(1771..1773,1783..1785,1819..1830,1837..1839,
1861..1863,1870..1872,1882..1884,1894..1896)
/gene="LOC128709962"
/note="5' RNA guide strand anchoring site [active]"
/db_xref="CDD:240015"
misc_feature order(1975..1977,1981..1983,2194..2196,2608..2610)
/gene="LOC128709962"
/note="active site"
/db_xref="CDD:240015"
ORIGIN
atgtatccagtcggccaacaatcaccatggacttcttcgccgccaaggcctccaagtccgtctcagtcgcagaccagcttcgatacactctcaccaccgccagcaggcgcgacggtcaacccgacaacggtggcgacgacgaccggaacgcaaggtgcccaggcactcggtgtcgtaccggccacaccaccggccccaccagacctaccggtgttcacatgtccgcgccggccaaatttgggccgcgaaggccgaccgattgtgctgcgggcgaaccacttccagatcacgatgccccggggctatgtgcatcactacgacatcaacatccagcccgacaagtgtccacggaaggtgaaccgcgaaatcatcgaaacgatggtgcacgcgtacagcaaaatgttcggcgcactcaagccggtgttcgacgggcgtaacaatctgtacacgcgcgatctgctaccgatcggtaacgatcgcgtcgagctagaggtgacgttgcccggcgagggcaaggatcgtgtgttccgcgtcacaatcaagtgggtggcacaggtgtctctgttcaatctggaggaagcgctcgagggtcgcacacggcagataccgtacgacgctatactggcgctggatgtggtaatgcgccatctgccgagcatgacgtacacaccggtcggaagaagtttcttcagctctccggatggatactatcacccactgggtggaggccgtgaggtatggtttggtttccaccagagcgtcaggccatcgcagtggaagatgatgctaaacattgacgtgtcggctaccgccttctacaaagcgcaaccggtgatcgagttcatgtgcgaagtgttggacatcagagacatcaacgagcagcgcaaaccgttgaccgactcgcagcgcgtcaagttcacgaaggaaatcaaggggctcaagatcgaaattacccactgtggtacgatgcgacgaaagtatcgcgtctgcaatgtgactcgacgacccgcacaaatgcaatcgttcccgttgcagctagagaacggccaaacggtagagtgtacggtggcgaaatacttcctcgacaagtataagatgaagctgcgctatccgcatctgccctgtctgcaggtgggccaggagcacaaacacacttacctcccgctggaggtatgcaacattgtggccggtcagcgttgcatcaagaagctgacggatatgcaaacgtctaccatgatcaaggcaactgcccgttcggctccggatcgagagcgagaaatcaataatctggtgcgacgggccgatttcaacaacgacgcgtacgtgcaggagtttggtttgaccatctcgaacaacatgatggaggtgcgaggacgtgtgcttccgccaccgaagctacagtacggtggtcgtgtttccagcatgagcggacaattactctccggtccacagaataaggtgagcttagcattaccaaaccaaggggtttgggatatgcgaggcaaacaatttttcactggcgtcgagattcgcgtatgggctatcgcctgtttcgcaccgcagcgcaccgtgcgggaggatgcactacggaacttcacccagcagttgcagaagatttccaacgatgctggtatgccgatcattggtcagccatgcttctgcaagtacgccactggaccggatcaggtggagccgatgttcagatatctgaagagcaccttcagtcacctgcagctcgtcgtcgtggtgctgcccggcaaaacacccgtttatgcggaagtgaagcgagttggtgacacggttctcggtatggcgacacaatgtgttcaggctaaaaatgtcaacaagacgtcaccacagacactgtccaatctctgcttgaagatcaacgtgaagctgggcggtatcaactcgatcctggtgccatcgatcagaccaaaggtattcgacgagcctgtcattttccttggcgccgatgtaacacatccaccggccggtgataacaaaaaaccctcgatagcagcagtggtcggttcgatggatgcgcatccgtcgcggtacgcggccaccgttcgtgtacagcagcaccgtcaggaaattattcaggagttgagtagtatggtgcgggagctgctaattatgttctacaaatcgaccggtggtttcaagccacaccgcattatactgtaccgggacggtgtatcggagggccagttcccgcacgtgcttcagcacgagctgaccgcgattcgtgaggcgtgcataaagctggaggcagattacaagccaggcatcacgttcatcgtggttcagaaacgtcaccacacgaggctattctgtgcggacaagaaggagcaaagtggtaaatcgggcaacattccagccggtacgaccgtcgatgtaggcattactcatccgaccgagttcgacttttacctgtgcagtcaccagggcattcagggcacgagtcgtccgtcccattaccacgtactctgggatgacaatcacttcgagtcggacgagctgcagtgcctaacgtatcaactgtgtcacacatacgtgcggtgtactcgatccgtgtccattccagctcctgcctactacgcacatctggtggcatttagggcgaggtaccacttggttgagaaggagcacgattctggcgaaggatcgcatcagagcggctgctccgaggacagaacgcctggtgcgatggcacgtgccattaccgtacacgccgacaccaaaaaggttatgtactttgcttaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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