LOCUS       XM_052195324            1494 bp    mRNA    linear   ROD 26-FEB-2023
DEFINITION  PREDICTED: Apodemus sylvaticus homeobox B8 (Hoxb8), transcript
            variant X2, mRNA.
ACCESSION   XM_052195324
VERSION     XM_052195324.1
DBLINK      BioProject: PRJNA899886
KEYWORDS    RefSeq.
SOURCE      Apodemus sylvaticus (European woodmouse)
  ORGANISM  Apodemus sylvaticus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Apodemus; Sylvaemus group.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_067481) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_947179515.1-RS_2023_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/25/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1494
                     /organism="Apodemus sylvaticus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10129"
                     /chromosome="10"
     gene            1..1494
                     /gene="Hoxb8"
                     /note="homeobox B8; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 14 Proteins"
                     /db_xref="GeneID:127693986"
     CDS             50..781
                     /gene="Hoxb8"
                     /codon_start=1
                     /product="homeobox protein Hox-B8 isoform X2"
                     /protein_id="XP_052051284.1"
                     /db_xref="GeneID:127693986"
                     /translation="

MSSYFVNSLFSKYKTGESLRPNYYDCGFAQDLGGRPTVVYGPSSGGSFQHPSQIQEFYHGPSSLSTAPYQQNPCAVACHGDPGNFYGYDPLQRQSLFGAQDPDLVQYADCKLAAASGLGEEAEGSEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKEKLERAPETAAEQGDAQKGDKK"

     misc_feature    485..655
                     /gene="Hoxb8"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      

cccaactacagcctgcgccaccgccgccgccgcctcaaaattcaataaaatgagctcttatttcgtcaactcactgttctccaaatacaaaaccggggagtccctgcgccccaattattatgactgcggcttcgcccaggacctgggcggccgacccaccgtggtgtacggtcccagcagcggcggcagcttccagcacccttcgcaaatccaggagttctaccacgggccatcgtcgctgtccacggctccctaccagcagaacccgtgcgcagtggcgtgccacggggaccccggcaacttctacggctacgaccctctgcagcgccagagcctgttcggtgcgcaggatccagacctggtacagtacgcagactgcaagctcgcggcagccagcggcctgggcgaggaggccgaggggtctgagcagagcccgtcgcccacacagctctttccctggatgcgtcctcaagccgccggacgcaggcgaggccgccagacctacagccgctaccagaccctggagctggagaaggagttcctatttaatccctatctgactcgcaagcggaggatcgaggtatcgcacgcgctgggactgacagagagacaggtcaaaatctggttccagaatcggagaatgaagtggaaaaaggagaacaacaaagacaagttccccagcagtaaatgcgagcaggaggagctggagaaagagaagctggagcgggcgccggagaccgccgccgagcagggcgatgcgcagaagggtgacaagaagtaggctccagctgggactgcctgggccccggactagcccgctcgtccgccggtccctcctgcgaccacgccgccgccgctgccgccgccgccgccgcccgccccccgcctccgagagctccggccccgcgagcggagccaggagctgggcctcccaccgcagcgtcccccgccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatctccttcccttctcttgggggtccgaggggaaaaataagaaaaggattttaagcaaggactccctcgtcctgcgagggtgatcgactgcggcctggcagaatcccctcgccccctccccatgtaaaaaagcctccttgtgcaatggtctttttcctttgaacgtgcttctttgtaatgaccgaggtaccgatttctgctaagttttcccaacaacatgaaactgcctattcacgccgtaattctatctgtctccctctcactttctctctttctctctctctctttctctcaccgcgtcctcatctttcctcgcaactcccctctccccgctgccctccctagctggctttctctcttgcttctctcttttcctcctgtccccccccccaccccctttggtttgacaattttgtcttaagtgtttctcaaaagagattactttagttagcatgcgcgctgtgagcaattgttaaaaagtgtt

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