LOCUS       XM_052143653            3495 bp    mRNA    linear   VRT 26-FEB-2023
DEFINITION  PREDICTED: Xyrauchen texanus protein argonaute-3-like
            (LOC127655708), mRNA.
ACCESSION   XM_052143653
VERSION     XM_052143653.1
DBLINK      BioProject: PRJNA901479
KEYWORDS    RefSeq.
SOURCE      Xyrauchen texanus (razorback sucker)
  ORGANISM  Xyrauchen texanus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Catostomoidei; Catostomidae; Xyrauchen.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_068290) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_025860055.1-RS_2023_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/25/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3495
                     /organism="Xyrauchen texanus"
                     /mol_type="mRNA"
                     /isolate="HMW12.3.18"
                     /db_xref="taxon:154827"
                     /chromosome="15"
                     /tissue_type="muscle - genome"
                     /collection_date="2018-09-01"
     gene            1..3495
                     /gene="LOC127655708"
                     /note="protein argonaute-3-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 34
                     Proteins"
                     /db_xref="GeneID:127655708"
     CDS             657..3239
                     /gene="LOC127655708"
                     /codon_start=1
                     /product="protein argonaute-3-like"
                     /protein_id="XP_051999613.1"
                     /db_xref="GeneID:127655708"
                     /translation="

MEIGTTGAVGAQSLFSVPRRPGYGTMGKPIKLLANCFQVEIPKMDVYLYEVDIKPEKCPRRVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVAPTGVDLDVTLPGEGGKDRPFKVSIKFVSLVSWHLLHEVLTGRSMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLENGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFKVRDEMAHVTGRVLPAPMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQPGITYIVVQKRHHTRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQVLAKAVQIHHDTLRTMYFA"

     misc_feature    873..1157
                     /gene="LOC127655708"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:465134"
     misc_feature    1185..1337
                     /gene="LOC127655708"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:462567"
     misc_feature    1338..1700
                     /gene="LOC127655708"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(1494..1496,1539..1541,1581..1583,1593..1595,
                     1647..1649,1668..1670,1674..1676)
                     /gene="LOC127655708"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1833..3110
                     /gene="LOC127655708"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(2244..2246,2256..2258,2292..2303,2310..2312,
                     2334..2336,2343..2345,2355..2357,2367..2369)
                     /gene="LOC127655708"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(2448..2450,2454..2456,2664..2666,3078..3080)
                     /gene="LOC127655708"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

ctgagagatagagagcgagttcacctccgacttatttacctcacagcgggcgataaactaagtgaaacaagcaatttagaaagccacggatttaacgggtgggcggggaatttcagtgcaaagaagacgtcgttttatggattttttccctgtcagatgggaatgtagcttagctggttagcctggtcactagcagtagcgggctagcgctccgtggaggcgacaaaagtgaactttctcacgttataacgacataaaacctcaatgttcgcctcagattttccaaagacgcgtttgtaaagaccgttgcaagactcgccgtcacagaaataccgattcgggactgtttccgaggggaatttctcgctttagctggatgattagctggccggcacgtctgtcaaccaaacctaaaatccggacgggatagtttgatttacacacctgcccttcgggtcttgaacggcctcctttggtatacgagcttctaggaaggtggtttcaggtgggattcgaaccaacaactagtggggagacactcgtttcggttctgaaccggttcgagggcacttttccccccttccccaagcacattaagagtcttctgaagtttgtgtactgcgagccggggacggaaccggacagagacctcatgaatggaaatcggaactacaggagccgttggggcccagtccctgttctccgtgccgcggagacctggctatggcaccatggggaagcccatcaagctgctggccaactgctttcaggtcgagatccccaagatggacgtgtacctgtatgaggtcgacatcaagcctgagaagtgtccccgccgagtgaatagggaggttgtggactccatggtacagcattttaaggtcaccatctttggggatcgaaggccagtttatgatggaaagagaagtctctacacagccaacccattacctgtggcacccactggcgtggacctggatgttacgctgccaggtgaggggggcaaagaccgaccctttaaggtcagcattaaatttgtatccctggtgagctggcacctgttgcacgaggtactaactggtcgcagtatgccggagccgctggagctggacaagccaatcagcactaacccagttcatgctgtggatgtggtactacgacacctaccatcaatgaaatacacacccgtggggcgttcattcttttctgccccggagggctatgaccatcctctgggtggaggcagagaggtgtggttcggctttcaccagtctgttcggccagccatgtggaagatgatgctcaacattgatgtatcagccacagctttctacaaagcacagccagtgattcagttcatgtgtgaggtactggacatccacaatattgacgagcagcctcgacccctcacagactcccatcgagtcaaattcaccaaagaaatcaaaggtctgaaagtggaggtgacgcactgtggaaccatgcggaggaagtaccgtgtctgcaatgtgacccgccgccctgccagccaccaaacgttccccttgcagttggagaacggtcaaactgtagaacgaactgtagctcagtatttcagagaaaagtacaacctgcagctcaaatacccccacctgccctgcctacaggtgggacaggagcagaagcacacttacttgcccctggaggtgtgtaatattgtagcaggacagcggtgcatcaagaaacttacagataatcaaacatccaccatgatcaaagccacggcgcgctcggcaccagacagacaggaggagatcagcagactggtgcgcagtgctaattatgaagcagacccgtttgtacaggagttccaatttaaggtgcgagacgagatggcccacgtgacagggcgtgtgttacctgcgcccatgttgcagtacgggggcaggaatcgcactgtggccacacccagtcatggcgtctgggacatgcgagggaaacaattccatactggagtggagatcaagatgtgggccatcgcctgcttcgccacacagagacagtgcagagaagagatactcaagggtttcacagaccagctgcgcaagatctcaaaggacgctgggatgcccatccagggccagccatgtttctgtaagtatgcacagggagcagacagcgtggagcccatgttcagacatttgaagaacacttactctggccttcagctcatcatcgttattctgcccggaaaaacacccgtctatgcggaagtgaagcgtgttggagacactcttcttggaatggccactcagtgtgtgcaggtgaaaaacgtggtaaaaacgtcccctcagacgctctctaacctctgcctcaaaatcaacgtcaaactgggcggcatcaataacatcctggtgccacatcaacgaccatcagtgttccagcagccagtcatatttctgggtgcagatgtcactcatccacctgcaggagacgggaagaagccttccatagcagcggtggtggggagtatggatgctcatccgagcaggtactgtgccacagttcgtgtccagaggcccagacaggaagtaattcaggatttggcctctatggtgcgagaattactcatccagttctacaagtccactcgctacaaacccaccagaatcatcttctacagggacggcgtgtcagagggacagtttagacaggtgttgtactacgagttgctggccattcgagaagcttgtatcagtcttgagaaggagtaccagcccggcatcacgtacatagtggtgcagaaacgccaccatacacgactcttctgtgccgatcgcaatgagagggtgggtcgtagtggaaacattcctgctggtacaacggttgacaccgatatcacacacccctatgagtttgacttttacctctgcagtcatgctggaatacagggcaccagccgaccctctcactaccacgtcctgtgggatgataactgcttcactgctgacgagttccagctgctcacttaccagttgtgccacacatatgtgcgctgtactcgctccgtctccatccctgcaccagcatactatgcccacctggtggccttccgtgcccgctaccatttagtggacaaagaacacgacagcgctgagggtagccacgtctccgggcagagtaatggccgggatccccaggtgctcgccaaagctgtgcagattcaccatgacaccctgaggaccatgtactttgcctgagccagcccacgttaaccccatattcaaccagtcatgcactcaaacccaacaaccacatacacggtcacatctccctcaagtctgtgcgtcctgaagggtcggtctctgtggtgatggaagtaccgcccaccccgcccagaaaatctggacctgacactgtgcagcaggaaaagacagggcctgcacgctggccttaggaagcagacctgctttaattcctcatgtggacctcagaactgttatgcaatataaaacc

//