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2026-09-23 14:29:21, GGRNA.v2 : RefSeq release 233 (Jan, 2026)

LOCUS       XM_051542295            1521 bp    mRNA    linear   PLN 01-NOV-2022
DEFINITION  Halteromyces radiatus PAZ domain-containing protein
            (BX664DRAFT_299180), partial mRNA.
ACCESSION   XM_051542295
VERSION     XM_051542295.1
DBLINK      BioProject: PRJNA895888
            BioSample: SAMN06265869
KEYWORDS    RefSeq.
SOURCE      Halteromyces radiatus
  ORGANISM  Halteromyces radiatus
            Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota;
            Mucoromycotina; Mucoromycetes; Mucorales; Cunninghamellaceae;
            Halteromyces.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Chang,Y., Wang,Y., Mondo,S., Ahrendt,S., Andreopoulos,W., Barry,K.,
            Beard,J., Benny,G.L., Blankenship,S., Bonito,G., Cuomo,C.,
            Desiro,A., Gervers,K.A., Hundley,H., Kuo,A., LaButti,K., Lang,B.F.,
            Lipzen,A., O'Donnell,K., Pangilinan,J., Reynolds,N., Sandor,L.,
            Smith,M.E., Tsang,A., Grigoriev,I.V., Stajich,J.E. and
            Spatafora,J.W.
  TITLE     Evolution of zygomycete secretomes and the origins of terrestrial
            fungal ecologies
  JOURNAL   iScience 25 (8), 104840 (2022)
   PUBMED   35996588
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1521)
  AUTHORS   Mondo,S.J., Chang,Y., Wang,Y., Ahrendt,S., Andreopoulos,W.,
            Barry,K., Beard,J., Benny,G.L., Blankenship,S., Bonito,G.,
            Cuomo,C., Desiro,A., Gervers,K.A., Hundley,H., Kuo,A., Labutti,K.,
            Lang,B.F., Lipzen,A., O'Donnell,K., Pangilinan,J., Reynolds,N.,
            Sandor,L., Smith,M.W., Tsang,A., Grigoriev,I.V., Stajich,J.E. and
            Spatafora,J.W.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (27-SEP-2021) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_026251691).
            
            ##Metadata-START##
            Organism Display Name :: Halteromyces radiatus CBS 162.75 v1.0
            ##Metadata-END##
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Halteromyces radiatus"
                     /mol_type="mRNA"
                     /strain="CBS 162.75"
                     /culture_collection="CBS:162.75"
                     /type_material="type material of Halteromyces radiatus"
                     /db_xref="taxon:101107"
                     /chromosome="Unknown"
     gene            1..>1521
                     /locus_tag="BX664DRAFT_299180"
                     /db_xref="GeneID:75867008"
     CDS             31..1521
                     /locus_tag="BX664DRAFT_299180"
                     /codon_start=1
                     /product="PAZ domain-containing protein"
                     /protein_id="XP_051399143.1"
                     /db_xref="GeneID:75867008"
                     /db_xref="InterPro:IPR003100"
                     /db_xref="InterPro:IPR014811"
                     /db_xref="JGIDB:Halrad1_299180"
                     /translation="
MAQASNRDLTELIMRPNTGTVGKQVRVRSNFFEMTSLPAQNIQRLNIQFLPEGTSLPVRRKLWKCFEDSPKGRAFLNKIKPVFDGRANLFSPKPLKCGDDNLGISFEVNLQQGNRSRGVFKLKIKPVGVINMGELQLLLDGKSLITSNCLMAIRVLETLFHHSPYMHYTTMGRSFYTLQGKRPLRNGAEVWQGFNQYARPTQGKMMVNIGVSSIAFYQPGPLHEMLPKLLGRRSLGELRRGIPDSERIKVEKILKNLEAVVVHRGAEKRLKYKINKLTPTSAENTVFKDDTGNEVTVAQHFQNTYNRHLAFPFLPCIVVKKNTFLPMEVCEVVSGQCPVETPSDYQKGEMIKFTWNTPNVRANLINQGFNVLDYKDDPYIQQFGVSVKPDMTMVNARVLPAPKISYHASASFTPVGGTWSLRGKKFANGATLESWSVVNFASSINDGSVRFFIRELGQMFIDKGLVSWFLFLFIYLFQEKKKTWFILIFHLLLFLL"
     misc_feature    271..498
                     /locus_tag="BX664DRAFT_299180"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:465134"
     misc_feature    388..>1398
                     /locus_tag="BX664DRAFT_299180"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
ORIGIN      
tttttttttacacgttattaaacgaacatcatggctcaagcatccaacagagatttgactgaacttattatgcgtcccaatactggcacagttggtaaacaagtacgtgtacgaagcaatttctttgaaatgacaagtcttccagctcaaaatatacaacgcttgaatattcaattcctaccggagggtacatctctacctgttcgaagaaagttgtggaaatgttttgaagatagtcccaaaggtcgagctttcctcaacaagatcaaaccggtctttgatggtcgtgcaaatctcttttctccaaaacctctaaagtgtggtgatgacaatcttggtatttcttttgaagtcaaccttcaacaaggaaatcgttctagaggtgttttcaagttaaaaatcaagcctgtaggtgtaatcaacatgggtgaattacaattacttttggatggaaagtctcttattaccagcaactgtttgatggccattagggtccttgagacattgtttcatcactctccatacatgcattatacaacgatgggtcgatccttttatactctccaaggtaaacgtcctttacgcaatggtgctgaagtatggcaaggcttcaatcaatacgctcgccctactcaaggcaaaatgatggtcaatattggtgttagctccatcgctttctatcaacctggccctcttcatgaaatgttacccaaactacttggccgccgcagtcttggtgaacttcgtcgtggtattcctgattctgaacgcatcaaggtcgaaaaaatactcaagaatctcgaggctgttgttgtccatcgtggtgctgaaaaacgattgaagtacaagattaacaagctcactcctacctctgctgaaaacactgtattcaaggatgatactggaaatgaagtgaccgttgctcaacactttcaaaacacttacaacagacatttggccttccctttcttaccctgtattgttgtcaagaagaatacctttttgcctatggaagtttgtgaagtagtttctggtcaatgccctgtagagacaccgagtgactatcaaaaaggtgaaatgatcaagtttacttggaatacacccaatgtgcgtgccaacttgatcaatcaaggtttcaacgtactcgactacaaggacgatccgtatattcaacaatttggtgtcagcgtcaagcctgatatgaccatggtcaatgctcgtgttcttccggctccaaagatctcttatcatgcttcagctagttttactcctgtcggtggtacttggagtctccgtggtaagaaattcgcaaacggtgccaccttggaatcctggtctgttgtcaattttgcaagcagtatcaatgatggttcggtacgattttttattcgtgaactaggtcaaatgttcattgataaaggtttggtaagttggtttctttttttatttatttatttatttcaagaaaagaagaaaacatggtttatactaatctttcacctattattatttcttttatga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]