GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2024-04-28 13:09:11, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_050661670            1264 bp    mRNA    linear   INV 19-SEP-2022
DEFINITION  PREDICTED: Diabrotica virgifera virgifera uncharacterized
            LOC114330671 (LOC114330671), mRNA.
ACCESSION   XM_050661670
VERSION     XM_050661670.1
DBLINK      BioProject: PRJNA862183
KEYWORDS    RefSeq.
SOURCE      Diabrotica virgifera virgifera (western corn rootworm)
  ORGANISM  Diabrotica virgifera virgifera
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga;
            Cucujiformia; Chrysomeloidea; Chrysomelidae; Galerucinae;
            Diabroticina; Diabroticites; Diabrotica.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_065451) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Diabrotica virgifera virgifera
                                           Annotation Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1264
                     /organism="Diabrotica virgifera virgifera"
                     /mol_type="mRNA"
                     /sub_species="virgifera"
                     /db_xref="taxon:50390"
                     /chromosome="9"
     gene            1..1264
                     /gene="LOC114330671"
                     /note="uncharacterized LOC114330671; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:114330671"
     CDS             42..1118
                     /gene="LOC114330671"
                     /codon_start=1
                     /product="uncharacterized protein LOC114330671"
                     /protein_id="XP_050517627.1"
                     /db_xref="GeneID:114330671"
                     /translation="
MTFRIVALLIMVTAFASLTQSSPLLIGHGVDKVHDASGDGESHLTKDELLKSHDTFGDGEVPLTKYELLKAHDAFGDGESHLTKDELLKAHDAFGDGEAHLTKDELLKAHDAFGDGEAHLTKDELLKAHDAFGDGESHLTKDELLKSHDTFGDEEAPLTKDELLKAHDAFGDGESHLTKDELLKAHDAFGDGEAHLTKDELLKAHDAFGDGEAHLTKDELLKAHDAFGDGESHLTKDELLKSHDTFGDEEAPLTKDEILKAHDAFGDGESHLTKDELLKAHDAFGDGEAHLTRDELLKAHDACEESDQPAFVVTYEEDPSVNPKTRGLSEIVDGILTVGNIAKGVISGVEIVKKVVGL"
     polyA_site      1264
                     /gene="LOC114330671"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
ttaatcatttaattcagttcttgcatcaaagaagatccaaaatgactttccgaattgttgcccttttgatcatggtgactgcgtttgcatctctaactcagtcttcaccactactgataggtcatggagtagataaggtccacgacgcatctggagatggagaatcacatctaacaaaggatgaactactaaaatctcacgacacatttggagatggagaagtacctctgacaaaatatgagcttctaaaggctcatgatgcatttggagatggggaatcacatctgacaaaagatgagctactaaaagctcatgatgcatttggagatggagaagcacatctgacaaaagatgagctactaaaggcccatgatgcatttggagatggagaagcacatctgacaaaagatgagcttctaaaggctcatgatgcatttggagatggggaatcacatctaacaaaggatgaactactaaaatctcacgacacatttggagatgaagaagcacctctgacaaaagatgagcttctaaaggctcatgatgcatttggagatggggaatcacatctgacaaaagatgagctactaaaagcccatgatgcatttggagatggagaagcacatctgacaaaagatgagttactaaaggcccatgatgcatttggagatggagaagcacatctgacaaaagatgagcttctaaaggctcatgatgcatttggagatggggaatcacatctaacaaaggatgaactactaaaatctcacgacacatttggagatgaagaagcacctctgacaaaagatgagattctaaaggctcatgatgcatttggagatggggaatcacatctgacaaaagacgagctactaaaagcccatgatgcatttggagatggagaagcacatctgacaagagatgagctactaaaggcccatgatgcatgtgaagaatcagatcaaccggcatttgtcgtgacatatgaagaggatccttcggttaatcccaaaacaagaggattaagtgaaattgttgatggtatactcacagttggaaatatagctaaaggtgttatatcaggtgttgaaattgttaagaaagtcgtaggtctttgagatccaccagaagttataaatgttgttgtgccagcacaacaacaaccagtcattgttcagcaactagggattactgtttagttagtaaacaaacaaagaagtatactaaagtttttgtcacaaataaatatatactaaacacataa
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]