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2025-07-01 07:35:25, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_050571531             981 bp    mRNA    linear   INV 09-SEP-2022
DEFINITION  PREDICTED: Adelges cooleyi germ cell nuclear acidic protein-like
            (LOC126837601), mRNA.
ACCESSION   XM_050571531
VERSION     XM_050571531.1
DBLINK      BioProject: PRJNA877624
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Adelges cooleyi (spruce gall adelgid)
  ORGANISM  Adelges cooleyi
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha;
            Aphidomorpha; Phylloxeroidea; Adelgidae; Adelges; Gilletteella.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026095926) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Adelges cooleyi Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Adelges cooleyi"
                     /mol_type="mRNA"
                     /isolate="19-005CV"
                     /isolation_source="galling 4th instar nymphs"
                     /host="Picea sp."
                     /db_xref="taxon:133065"
                     /chromosome="Unknown"
                     /tissue_type="whole body"
                     /geo_loc_name="USA: Idaho, Franklin county, ID-36 through
                     Emigration Canyon"
                     /collection_date="2019-07-23"
                     /identified_by="Carol von Dohlen"
     gene            1..981
                     /gene="LOC126837601"
                     /note="germ cell nuclear acidic protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins"
                     /db_xref="GeneID:126837601"
     CDS             1..981
                     /gene="LOC126837601"
                     /codon_start=1
                     /product="germ cell nuclear acidic protein-like"
                     /protein_id="XP_050427488.1"
                     /db_xref="GeneID:126837601"
                     /translation="
MAPLERDPPKFLFDHIKDINEDFLTDDEEELFPERLIYNDIDTRDRDTDEEIDINTDELNNYIPEIVLEVIRQWSTYFNSAVPPLVNNHDRKTEDSDDESIETDETDDRETEDNDDESIETDETDDRKTEDSDDKETEDNDDTESEDNDDESIETDETDDRETEDNDDTETEDSDDKETEDNDDTESEDNDDESIETDETDDRETEDNDDKSIETDETDDTETEDNDDESIETDETDKIHDDDEYSRNFMPTYSFDARLAYFNAIHPPVNERRPVESDSDDPQPCSSSGLKRPRSDSDDEQPRSTKRRWPTSYQSESEESESDNFQ"
     misc_feature    277..>906
                     /gene="LOC126837601"
                     /note="amidase domain-containing protein; Region:
                     PRK08581"
                     /db_xref="CDD:236304"
     misc_feature    <325..606
                     /gene="LOC126837601"
                     /note="DNA polymerase phi; Region: DNA_pol_phi; pfam04931"
                     /db_xref="CDD:461488"
ORIGIN      
atggcaccgttagaaagagatccacccaaattcttatttgatcatataaaagacataaacgaagacttcttgacggacgacgaagaagagttatttccagaacgccttatatacaacgacatagacacaagagatagagacacggacgaagagattgacataaacaccgacgagttaaataactatatacctgaaatagtattggaagtcattagacaatggagtacatactttaatagtgctgttccgccacttgtcaacaaccatgacagaaagacagaggacagcgatgacgagtcaattgagacagacgaaaccgacgacagagagacagaagacaacgatgacgagtcaattgagacagacgaaaccgacgatagaaagacagaggacagcgatgacaaagagacagaggacaacgatgacacagagtcagaggacaacgatgacgaatcaattgagacagacgaaaccgacgacagagagacagaagacaacgatgacacagagacagaggacagcgatgacaaagagacagaggacaacgatgacacagagtcagaggacaacgatgacgaatcaattgagacagacgaaaccgacgacagagagacagaagacaacgatgacaagtcaattgagacagatgaaaccgatgacacagagacagaggacaacgatgacgagtcgattgagacagacgaaaccgacaaaatccacgacgacgacgaatattcccggaacttcatgcccacatacagcttcgatgcaaggcttgcatatttcaacgccattcacccgcctgtcaacgaacgccgaccagttgagtcagactcggacgacccgcagccgtgctcatcatcaggtctgaagagaccgcgttcagactctgatgatgagcaacccaggtcaacaaagcggagatggccaacgtcgtaccagtcagaaagtgaagaaagcgagtcggacaactttcaatag
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]