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Previous release (v1)
2026-10-06 01:31:48, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_050564013 825 bp mRNA linear INV 09-SEP-2022
DEFINITION PREDICTED: Adelges cooleyi probable ATP-dependent RNA helicase
ddx56 (LOC126832719), mRNA.
ACCESSION XM_050564013
VERSION XM_050564013.1
DBLINK BioProject: PRJNA877624
KEYWORDS RefSeq; includes ab initio.
SOURCE Adelges cooleyi (spruce gall adelgid)
ORGANISM Adelges cooleyi
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha;
Aphidomorpha; Phylloxeroidea; Adelgidae; Adelges; Gilletteella.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_026095750) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: Adelges cooleyi Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 63% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..825
/organism="Adelges cooleyi"
/mol_type="mRNA"
/isolate="19-005CV"
/isolation_source="galling 4th instar nymphs"
/host="Picea sp."
/db_xref="taxon:133065"
/chromosome="Unknown"
/tissue_type="whole body"
/geo_loc_name="USA: Idaho, Franklin county, ID-36 through
Emigration Canyon"
/collection_date="2019-07-23"
/identified_by="Carol von Dohlen"
gene 1..825
/gene="LOC126832719"
/note="probable ATP-dependent RNA helicase ddx56; Derived
by automated computational analysis using gene prediction
method: Gnomon."
/db_xref="GeneID:126832719"
CDS 1..825
/gene="LOC126832719"
/codon_start=1
/product="probable ATP-dependent RNA helicase ddx56"
/protein_id="XP_050419970.1"
/db_xref="GeneID:126832719"
/translation="
MAPLERDPPKFLFDHITDINEDFLTDDEEELFPERLIYNDIDTRDRDTDEEIDINTDELNNYIPEIVLEVIRQWSTYFNSAVPPLVNNHDRKTEDSDDESIETDETDDRETEDNDDESIETDETDDRETEDNDDTETEDSDDKETEDNDDTESEDNDDESIETDETDDRETEDNDDESIETDETDKIHDDDEYSRNFMPTYSFDARLAYFNAIRPPVNERRPVESDSDDPQPCSSSGLKRPRSDSDDEQPRSTKRRRPTSYQSESEESESDNFQ"
misc_feature <280..555
/gene="LOC126832719"
/note="DNA polymerase phi; Region: DNA_pol_phi; pfam04931"
/db_xref="CDD:461488"
ORIGIN
atggcaccgttagaaagagatccacccaaattcttatttgatcatataacagacataaacgaagacttcttgacggacgacgaagaagagttatttccagaacgccttatatacaacgacatagacacaagagatagagacacggacgaagagattgacataaacaccgacgagttaaataactatatacctgaaatagtattggaagtcattagacaatggagtacatactttaatagtgctgttccgccacttgtcaacaaccatgacagaaagacagaggacagcgatgacgagtcaattgagacagacgaaaccgacgacagagagacagaagacaacgatgacgagtcaattgagacagacgaaaccgacgatagagagacagaggacaacgatgacacagagacagaggacagcgatgacaaagagacagaggacaacgatgacacagagtcagaggacaacgatgacgaatcaattgagacagacgaaaccgacgacagagagacagaggacaacgatgacgagtcaattgagacagacgaaaccgacaaaatccacgacgacgacgaatattcccggaacttcatgcccacatacagcttcgatgcaaggcttgcatatttcaacgccattcgcccgcctgtcaacgaacgccgaccagttgagtcagactcggacgacccgcagccgtgctcatcatcaggtctgaagagaccgcgttcagactctgatgatgagcaacccaggtcaacaaagcggagacggccaacgtcgtaccagtcagaaagcgaagaaagcgagtcggacaactttcaatag
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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