2024-09-08 08:46:08, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS XM_046725384 360 bp mRNA linear INV 14-FEB-2022 DEFINITION PREDICTED: Haliotis rubra uncharacterized LOC124288830 (LOC124288830), transcript variant X2, mRNA. ACCESSION XM_046725384 VERSION XM_046725384.1 DBLINK BioProject: PRJNA801670 KEYWORDS RefSeq. SOURCE Haliotis rubra (blacklip abalone) ORGANISM Haliotis rubra Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Vetigastropoda; Lepetellida; Haliotoidea; Haliotidae; Haliotis. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_025767109) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Haliotis rubra Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..360 /organism="Haliotis rubra" /mol_type="mRNA" /isolate="DU_JTF1" /isolation_source="Aquaculture farm" /db_xref="taxon:36100" /chromosome="Unknown" /tissue_type="muscle" /dev_stage="adult" /geo_loc_name="Australia: Jade Tiger Abalone Farm, Indented Head, Victoria" /collection_date="2017" /collected_by="Adam Miller" gene 1..360 /gene="LOC124288830" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns" /db_xref="GeneID:124288830" CDS 11..355 /gene="LOC124288830" /codon_start=1 /product="uncharacterized protein LOC124288830 isoform X2" /protein_id="XP_046581340.1" /db_xref="GeneID:124288830" /translation="
MDHEYRDQVVKLSQAEDYTAFEDLIQMAGCISMVHTLSRRQEMCKAHQGFDQFCRGLETLGVLGALKHHGTRMKEVFEYEKRLLDSTTIELLFEADLAKANSNRRRQEEIVLSN"
ORIGIN
aaaccacattatggaccacgaatacagggatcaagtggtgaagttatctcaggccgaggattacacggcctttgaagacctgattcagatggcaggttgtatatccatggtccatacgctgagcaggcgacaagaaatgtgcaaggcacatcaaggttttgaccaattctgcagaggacttgaaacgcttggcgtattaggagcgctaaaacatcatggaacacgcatgaaagaagtttttgaatatgaaaaaaggcttctggattctacaacaatagaactattgttcgaagcagatttagcaaaggccaactccaaccgacgccgccaagaagagattgttctctcaaactagagaga
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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