2025-04-04 04:31:30, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_045224624 1079 bp mRNA linear VRT 30-NOV-2021 DEFINITION PREDICTED: Coregonus clupeaformis uncharacterized LOC121580520 (LOC121580520), transcript variant X3, mRNA. ACCESSION XM_045224624 VERSION XM_045224624.1 DBLINK BioProject: PRJNA780548 KEYWORDS RefSeq. SOURCE Coregonus clupeaformis (lake whitefish) ORGANISM Coregonus clupeaformis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Coregoninae; Coregonus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_059205) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Coregonus clupeaformis Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1079 /organism="Coregonus clupeaformis" /mol_type="mRNA" /isolate="EN_2021a" /db_xref="taxon:59861" /chromosome="14" /sex="female" /tissue_type="muscle" /dev_stage="adult" /note="dwarf form" gene 1..1079 /gene="LOC121580520" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:121580520" CDS 265..996 /gene="LOC121580520" /codon_start=1 /product="uncharacterized protein LOC121580520 isoform X3" /protein_id="XP_045080559.1" /db_xref="GeneID:121580520" /translation="
MTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCPRYCGDHDYHPLLCPRYCGDHDYHPLS"
ORIGIN
tgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcttaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtgatgatcatgactaccatcctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcttaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgtcctaggtac
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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