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Previous release (v1)
2026-09-23 14:28:54, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_041809636 2711 bp mRNA linear VRT 26-MAY-2021 DEFINITION PREDICTED: Cheilinus undulatus testis and ovary specific PAZ domain containing 1 (topaz1), transcript variant X5, mRNA. ACCESSION XM_041809636 VERSION XM_041809636.1 DBLINK BioProject: PRJNA731939 KEYWORDS RefSeq. SOURCE Cheilinus undulatus (humphead wrasse) ORGANISM Cheilinus undulatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Labriformes; Labridae; Cheilinus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_054880.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Cheilinus undulatus Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2711 /organism="Cheilinus undulatus" /mol_type="mRNA" /db_xref="taxon:241271" /sex="female" /tissue_type="muscle" /linkage_group="16" gene 1..2711 /gene="topaz1" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:121524304" CDS 34..2127 /gene="topaz1" /codon_start=1 /product="protein TOPAZ1 isoform X5" /protein_id="XP_041665570.1" /db_xref="GeneID:121524304" /translation="
MLISTAGYLGCPQTILKDINTQVQQDPLTQRALREEWSEPLAADSVGTVNLFLLSGTHWVHFDANNNHVKESFERIQPAKTITSQQNPIPARITTKNGVWNSNQANMAELRRQQTNVYCRQYFSESLSCGYKMCWFLHIPVDGDEKFCIETVIRFTKNPMCLQKAGAVFTGYYENNHPGVYFSMPVLLSLLWALLKAGMVSEVFSVLSVCLTHKIVPGHEFLLGLFNCVREKGLLSLVPELMQLTFKMANAGLLLSLDCLDSVKNTPEFQQTNSHVSGTGPNKVSPSAPFPEYLNLAHSIVEIELCTKQEDWRRMGEVFRSICQSSQRPNQVERISGRITIALLSESKDKLSLPFAAFAETACKNEEGESLNRSFCGRIGISLMLRYYKTHQWAKGRRVVEVLSCSKVNYTTLQGLFGNENGTSRCYLVTVAAELFLQSGSVEGALNTLRENKWFVSSASWPCESSDLESRIRVLQRLAEKSSHRDSLEVLSNLPGLKEPNNLLDISMYTPLFNTHLQMCLERHTLPVASDTVDFMFSKNLAVDQAMLHMLLNKLGKQNLWLRARDLFRHSLRVGYYPGVCAPPGSMFLVVPCRLGELELALTLEMFITVNANSLLHLPENSTSHLSITLKRTQSCESEYLSASNRLASAACIPNPKLDVLYTTVNSAQEQVYTLDISSARAWLRQNHLWANEVWTH"
misc_feature 940..1458
/gene="topaz1"
/note="Putative aspartate racemase; Region:
Asp_Glu_race_2; pfam14669"
/db_xref="CDD:464250"
ORIGIN
ctcctatgctaagctaagctagctggcggctaaatgctaatttcaacggctggctacttgggatgtcctcagactatactgaaagacataaacacccaagtccagcaggacccactgactcagagggctcttcgagaagagtggtcagagcctctggctgcagactctgtggggactgtaaatttatttctcctcagtggaacacactgggttcattttgatgccaacaacaatcatgtaaaggaaagctttgaaaggatccaacccgccaagactataacctcacagcaaaatcccatccctgctaggataaccacaaaaaatggagtgtggaattcaaaccaagctaacatggcagagctaaggcgccagcaaactaatgtttactgcagacagtacttcagcgagtcgttgtcctgtgggtacaagatgtgctggttcctgcatatacccgtggatggggacgagaagttttgcattgaaactgtgatacggttcaccaaaaatccaatgtgccttcaaaaagcaggagctgtgtttacaggctactatgagaacaaccatccaggagtttatttttccatgcccgtgcttctgtctctcctctgggctcttctcaaagctggtatggtgtctgaggtcttctcagtcctgagcgtctgcttgactcacaaaatagtgcctggtcatgagttcttgttgggcctcttcaactgtgtgagagaaaagggtctcctcagtctagtgcctgaacttatgcagctcacattcaagatggctaatgcaggcctgttgctgagcttggactgcctggacagtgtaaaaaacactcctgagttccagcaaacaaactcacacgtgtctgggactggtcccaacaaggtatctcccagtgcacccttcccagagtacctgaatttggcccattccatcgtggaaatagagctttgcaccaaacaagaggactggaggcggatgggggaggttttcaggtccatctgccaatccagccagcgccccaaccaagtggagcgaatcagcggtcgcataactatagcgctgctgtctgagagcaaagacaagctgtctctgcctttcgctgcatttgctgagactgcatgcaagaatgaagagggagaaagcctgaacagaagtttctgtggcagaatcggaatctcactcatgttaagatactacaaaacccatcagtgggcaaagggtcggagggtggtggaggtgctgtcgtgttccaaggtgaactacacgactctgcaaggattgtttgggaatgagaatggaacatctcgctgctaccttgtgaccgtggcggctgagctcttcctgcagagcggcagcgtagagggcgctctaaacacgctccgagaaaacaaatggtttgtgagctcggcttcatggccctgtgagtcttctgatctggagagcaggattagggtgctgcagcgtctggctgaaaaatcctctcacagagactctctggaggtcctcagtaatctccctggactcaaagaaccaaacaacttgttggatatctccatgtacacacccctctttaacactcatctgcaaatgtgcttggagagacacacacttcctgtggcgtcggacaccgtggacttcatgttctctaaaaatctggcagtagatcaggccatgctgcacatgcttctaaacaaactgggcaagcagaacctctggctccgtgcacgagacctcttcagacactctctgagagtgggctactaccccggtgtgtgcgctccccctggatcaatgtttctggtagtaccctgccgactcggagagttggagctggctctcaccctggagatgttcatcaccgtcaatgcaaacagtctcctccacctgccagagaactccacttctcacctcagcatcactctaaaaaggactcaaagctgtgagagcgagtacctcagcgctagcaaccgcctcgcctctgctgcttgtatacccaatcccaaactcgatgtcctctacacaactgtgaactctgcacaggagcaagtttacacccttgacatttcctccgctcgagcctggctccgccagaatcatttatgggccaatgaggtgtggacgcactgaacgaagcgccgaaccgagccgctaactgcttcactttgctttgtattgaaactgctcatgttccagaaacctctgactctgctgacacaaatgaaatcaggaaaaccagcgcttgtggatttctgttggctgtttatttgttaaaccaaacatcacttttcaatttgaataagaagcagaaaatcctaaagactgcctccaggtctctcctctagactgataacttatttttgttctcgtttgtttgataataagtttaagtgttccttgtcagcttccgtaggacttcattatggttatttgtctttaattgatgtcgctcagggtttatgtgatttagaatctgaaaaacattttttgttgagggtcaaaggttagcatgtttggttcataacacatgtaaataccatctgagtgtacataggtcatatttaaaggggtgtgtagtctttgacagtgttatgttgctgtattgtatgagactgtcagagcctcaattgttgcttgttctagagctgccatttatatttcctttgtatgaagttttatatttaaaaaaacagaagtttttctgctccaaaata
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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