LOCUS       XM_034093501            2125 bp    mRNA    linear   VRT 07-FEB-2025
DEFINITION  PREDICTED: Pseudochaenichthys georgianus vimentin-related 2
            (vimr2), transcript variant X2, mRNA.
ACCESSION   XM_034093501
VERSION     XM_034093501.2
DBLINK      BioProject: PRJNA629555
KEYWORDS    RefSeq.
SOURCE      Pseudochaenichthys georgianus (South Georgia icefish)
  ORGANISM  Pseudochaenichthys georgianus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Notothenioidei;
            Channichthyidae; Pseudochaenichthys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_047512.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Feb 7, 2025 this sequence version replaced XM_034093501.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_902827115.2-RS_2025_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/30/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2125
                     /organism="Pseudochaenichthys georgianus"
                     /mol_type="mRNA"
                     /db_xref="taxon:52239"
                     /chromosome="10"
     gene            1..2125
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:117454315"
     CDS             68..1180
                     /gene="vimr2"
                     /codon_start=1
                     /product="vimentin isoform X2"
                     /protein_id="XP_033949392.1"
                     /db_xref="GeneID:117454315"
                     /translation="

MTPQDPSFPVFGTLCPPLRGASIDECDCDNLDFVAAKALNKEGLSRFVQDRNVIGSLNDRLVRVIELAHCFEEENESLECQIVDLEEQLSRRQASSSSSSVVLPHFSLDAVVERLRMERDEILCDTEERQKELERLVTEYEKAAQQRILLLQDRQDVAEDVDAVTAECLALREQVAIYEEQLANMEAQHKTAVESMLEPDEGTTGAMRAITFGVPDITAALDVKEYYCQLAESLQFECGAASSAVVPRGDGKQLQVGGAAGSKVKDLSKMRDVSEVKKLIAELQKELAELEKCNEELEDEVEMKKAAYMDEIAELEGTLDEMRQQEEDFQVQMKEQCEDYKELLSEKMAREMEITAYRSLLEEEECLCGQ"

     misc_feature    212..1165
                     /gene="vimr2"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:459643"
ORIGIN      

tggtcaaacacttactgtgtttgccttttctttattaaagtcattaactatccctgaaggtggacaaatgaccccccaggatccttcatttccagtctttggtactttgtgtcctcctctcaggggggcctccattgatgagtgtgactgtgacaacttagactttgtagctgcgaaggcgctcaacaaagagggtctgagccggtttgtccaggacagaaacgtcatcggttctctgaacgaccgcctggtccgggttattgagctggctcattgttttgaggaggagaacgagtctcttgaatgtcagatagttgatctggaggagcagctgagcaggcggcaggcctccagcagctcctcctctgtggtcctgcctcacttcagtctggatgctgtggtggagaggctgcgcatggagagggacgagatcctgtgtgacaccgaggagcggcagaaagagctggagcgtctggtgacagagtatgagaaggccgctcagcagaggatcctcctgctgcaggaccggcaagatgttgctgaggatgtcgatgctgtgacagcagagtgtttggcgctgagggagcaagtggctatctacgaggagcagctggccaacatggaggcccagcacaagacggcggtggagagcatgttggagccagatgaagggacgacaggagcgatgagagctattacatttggtgtccctgacatcactgcggccctggatgtgaaggagtactactgccagctggctgagagcctccagtttgagtgcggtgcagcatcctctgctgtggttccccgtggtgatggaaaacaactgcaagtgggaggagctgcagggtcaaaggtgaaagacctgtcaaagatgagggacgtcagtgaagtgaagaagctgattgcagagctacagaaggagctcgctgagcttgagaagtgtaacgaggagctggaggacgaggttgagatgaagaaggctgcgtacatggacgagatcgccgagttagagggtactttagatgaaatgcggcagcaggaggaagacttccaggtgcagatgaaggagcagtgtgaggactacaaagagctgctcagcgagaagatggcccgagaaatggaaataaccgcctacaggagtctgttggaagaagaggagtgcctgtgtggccagtgactcgagagtcagactggatgctccctctcacatggattagaaaacaaaccaaagagaactgtgaaacacacacttggatgaagcttaaggtaccaacgcagcaattaaaatagaacttatcgcgacagattaatgccgtctggaggcctgagccgggcggtgataacgggtcgctggcagatgacctcgagactccaagaaagatggagctgtctaaaagaggtgggaggatcggggccgggcgatgagtgtgtatccattcagtgtctgtctgggatatttccttaagtgggttttatctctaccagctccctgatatgattcataaaagtgttgtctcttctttgaagaacgatctccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaagtttaactgtgcggctccgtgaagtcatcccccctctgataccacctcgtccatcatccaaactctgtctgattaccggctcttaacctttgaccccttcactgttaacaaacatatcgacagctctacttttggtacttaaaagcctccgaccttccctttgcttttacagtcatgcattcgtgtttagtttgacttataactgacagtcaagtctttcgcacactgtttgcttttcaaatggttcatgacgctttctctgctttgacacaaagagcacctggatgtttctacaaggaaagccggtgtgattcattattcctcctttgaaaatcaatgtcccaatttgctctcgtttcagatataaggatctgcattcctctgtaatcttttccttattttctacatgacttttcaagctgtctgtaataaatcattttttctttacgcttctgcccaagcgtcag

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