LOCUS       XM_033878572            3288 bp    mRNA    linear   INV 28-APR-2020
DEFINITION  PREDICTED: Pecten maximus caspase-3-like (LOC117323380), transcript
            variant X2, mRNA.
ACCESSION   XM_033878572
VERSION     XM_033878572.1
DBLINK      BioProject: PRJNA625562
KEYWORDS    RefSeq.
SOURCE      Pecten maximus
  ORGANISM  Pecten maximus
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae;
            Pecten.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_047015.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Pecten maximus Annotation Release
                                           100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3288
                     /organism="Pecten maximus"
                     /mol_type="mRNA"
                     /db_xref="taxon:6579"
                     /chromosome="1"
     gene            1..3288
                     /gene="LOC117323380"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 long SRA reads, 20 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 6 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:117323380"
     CDS             498..1445
                     /gene="LOC117323380"
                     /codon_start=1
                     /product="caspase-3-like isoform X2"
                     /protein_id="XP_033734463.1"
                     /db_xref="GeneID:117323380"
                     /translation="

MGRTVTMHTSTDSLTPTSTFLSPHNSVDCPGPPYILRRPSGDRRSVRPGAPSEPNEYNFNYHKRGLFLIINNKNFHPSTGQVTREGTNVDAERLEERFQDLGFEVRRYNDVASSKITKIMYDASEYDHSDCDCFGCAILSHGIEGRIYATDGILPLEMLIVPFKGERCPTLVGKPKLFFLQACRGISNEASLDLTDSVSDRSGYSEEFESCMHPLRKIPVEADFLFSYSTVPGCYSWRNNQDGSWFIQALCIVLENYGPKMELLHMLTQVNRIVTYEFESCTDEEFTENIKQMPCIVSMLTRYVYFRPKKPDIRD"

     misc_feature    666..1415
                     /gene="LOC117323380"
                     /note="Caspase, interleukin-1 beta converting enzyme (ICE)
                     homologues; Cysteine-dependent aspartate-directed
                     proteases that mediate programmed cell death (apoptosis).
                     Caspases are synthesized as inactive zymogens and
                     activated by proteolysis of the peptide...; Region: CASc;
                     cd00032"
                     /db_xref="CDD:237997"
     misc_feature    order(747..749,921..923,1038..1040,1059..1061,1200..1217,
                     1227..1232)
                     /gene="LOC117323380"
                     /note="substrate pocket [chemical binding]; other site"
                     /db_xref="CDD:237997"
     misc_feature    order(918..920,1044..1046)
                     /gene="LOC117323380"
                     /note="active site"
                     /db_xref="CDD:237997"
     misc_feature    order(1062..1064,1155..1160,1179..1181,1188..1190,
                     1197..1199,1266..1268,1290..1292,1308..1310,1368..1370,
                     1383..1388,1392..1394,1401..1406)
                     /gene="LOC117323380"
                     /note="dimer interface [polypeptide binding]; other site"
                     /db_xref="CDD:237997"
     misc_feature    order(1065..1067,1152..1154)
                     /gene="LOC117323380"
                     /note="proteolytic cleavage site [active]"
                     /db_xref="CDD:237997"
ORIGIN      

cgtactgttggaggatatactccgactaatgtgtcgatggcgaaggctttttatgtcgttaaagaacgaggagacacaatctgatgtttccatgaagctgtttcaacttgtcatcgttgatggtggacaagatagcagagacgcaactatacagtaattcactggatcatatcaacagtcggtttacaaatgagctagccgtcggattggtgtaaataaagagaaaacgtagacagaaaactcaccgggagtttcaaacagcactaatattgatatgtttttatttatttcatcgttacacctgttttaaatgttcatcctaagccgaagtttgtggagatgtaaagttgcaaatgacaatattttaggaattgtgtttacggatttaaacgtggtgcggtagggataagattttatctacaatagttttgatacgtgaagttaagatttgttgacggaagttgtcagcattgtgtcagaactacatatcactgtacatgggacgtaccgtaacaatgcatacgtccacagattcactaacgcccacgtcaacctttctgagtccccacaactccgtcgactgtcccgggcctccgtacatcctacgtagaccaagtggtgatcggcgttctgtccgaccaggtgccccttcagagccgaatgagtacaactttaactaccataaacggggcctgtttctgatcatcaataacaagaacttccacccctccacgggacaggtgacccgggaaggtaccaacgttgacgcagaacgcctggaagaaagattccaagatctggggtttgaagtcagacgttacaacgacgtagcaagctccaagatcactaagataatgtacgacgcctcggagtacgaccactcggactgtgactgtttcggctgtgccatcctcagccacggtattgagggccgtatctacgccacggacggcatactgcctctggagatgctgattgtcccatttaagggtgagcgctgcccaacactggtcggcaagccaaaactctttttcctccaggcgtgccgcggaataagtaacgaagcttcccttgacctcacagacagcgtgtcagacagaagtggctactccgaagagttcgaatcttgtatgcatcctttgaggaaaatccctgtggaggcagatttcttgttttcttactccacagttccaggctgctactcgtggaggaataaccaggatgggtcatggtttatacaggccttgtgtattgtcctggaaaattatggaccaaaaatggaactccttcatatgctgacccaagtgaacagaatagtgacttacgaattcgagtcctgtactgacgaggagttcacagagaacattaaacagatgccttgtattgtgtccatgttgactagatatgtttacttccggcccaagaaaccagacatccgggattaagggactacagcattctgtgttagtgttgaaggcagccttcatcctcattataaccatgtaaacatgcttctgtgagccttggtacagggatgtatatctaagtgtcatataccagtatgtcaatatatgtgtaatgccggaaccagtcaactacaaaactaagctaatttagtgaaaatagcaaatctgaaaatgtgaaattgcatagaaattaacattggaaatggagcaagtctaaaatacatgaatgagaaaggtaaaccaataggggttgtttgtaatgaccttagatgttaataggacgttaaacaaaataaaccaaactgccaaatattactatctttgtatgaggaccttgaattgttaacagatatattcaaatgaaatcgagatttcttgccttttgtgaggacattttataaacaaaagtattttctaccttacgtaagtaatgcagatgttatatacattttcacacaacggcagccctttgttcgggttatagattttgatatacaccgtacatggtgcatcatctaaaacgtacataccaatccctataacactggtttagaccactactccatcgcttaggctgtaatgcagtactatcttccaggtaatcattgtcaatacgtatgcagtcaaacactgttgctcattctctatatatttttattgtggttttggtttgtattgtaatgaagaagagtaatagagtatttcacagtgttcttctagttatccatccaagctgtcttgcccgctgacagattctttccgtgtcatgcaggtattcggtctagatatactttgaacatgtcaggacggaccttaaacctgtcagtatatgtttccctcggcgtagacggaccttgaacttgtcagtatgtcagtttccatcggtttagacaaaccttgaacttgtcagtatatatgtttccatcggccaagacggaccttgaacttgtcagtatgtcagtttccatcggccaagacggaccttgaacctgtcagtatgtcagtttccatcagtctagacggaccttgaacctgtcaatatatgtttccctcggactagacggaccttgaacttgtccgtatatgtgtttcactcggtctagacaaaccttgaacctgtccgtatatgtgtttccctcggtctagataaaccttgaacctgtcagtatatatgtttccctcggccaagacggaccttaaatatgtcagtaaatatatttctctaggtctagacgaaccttaaacctgtcggtatgtgcgtttccctcggcgtagacggaccttgaacctgtcagtatatatgtttccatcggtcttgacggaccttgaacttgtcagtatgtcattttccatcggcctagacggactttatacctgtcttaatatatgtttccctcgatctagacggactttgaacctgtcagttaccacgaagatgtgagggatgatctgaggttgtccgacctaaatataaatcaaatgacgttgtcataactatatggagtaacaatccgagaataaattgtaattgttattaattttatagagtaacagtcctcaagtgaattatcattgttatttgaagagtaacaatcttaaagtgaatggtaattgtttcttatagtgtaacaatccgagagtgaataagcattgttttttacggagtaacaatcctaaagtgaatggtcattgctatttacggagtaacaatccaggagctcgtgatacacgtaacactccccataccaaatcgtacttaaaacgttgctttgatcgcaccatatatcatataatcctgtcacaataaaacaatacaatccag

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