LOCUS       XM_031791546            2012 bp    mRNA    linear   VRT 09-DEC-2019
DEFINITION  PREDICTED: Oncorhynchus kisutch butyrophilin subfamily 3 member
            A2-like (LOC109886139), transcript variant X27, mRNA.
ACCESSION   XM_031791546
VERSION     XM_031791546.1
DBLINK      BioProject: PRJNA378663
KEYWORDS    RefSeq.
SOURCE      Oncorhynchus kisutch (coho salmon)
  ORGANISM  Oncorhynchus kisutch
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_034189.2) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oncorhynchus kisutch Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2012
                     /organism="Oncorhynchus kisutch"
                     /mol_type="mRNA"
                     /isolate="150728-3"
                     /db_xref="taxon:8019"
                     /sex="female"
                     /tissue_type="muscle"
                     /dev_stage="juvenile"
                     /geo_loc_name="Canada: Vancouver"
                     /linkage_group="LG16"
                     /note="double haploid"
     gene            1..2012
                     /gene="LOC109886139"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 long SRA read, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:109886139"
     CDS             207..1877
                     /gene="LOC109886139"
                     /codon_start=1
                     /product="butyrophilin subfamily 1 member A1-like isoform
                     X27"
                     /protein_id="XP_031647406.1"
                     /db_xref="GeneID:109886139"
                     /translation="

MKTFPTSAVWCFGILFISASLITTGSSEVQVVGPADRVDALAGDDIILPCSLKPNISAKDMLVQWTGLYLKTRNVHLYRQGRDSNEDQFPSYRGRTSMFHEELKNGNVSLKLTRVTLSDAGSYRCFLPTLTSQVKETTVQLFVGAVSQPVISIVGTKDWGVVLKCESGGWFPEPEMEWLDSSGTILPADGPPERHRDSEDLYALRRHVTVDQTDTNRFTCRVHQTEINHLKETEIHVPDDVFPKSHVGLIIGLSILLAVVVLAASAGVYKWRKHTDKVTRERDGLKGELMELREENNKLKIETDNVKMEREKFRKDNDKLKIETDNVKMEREKFRKDNDKLKIETDNVKMEREKFRKDNDKLKIETDNVKMEREKFRKDNDKLKIETDNVKMEREKFRKDNDNVKMEREKFRKDNDKLKIETDNVKMEREELREENNKLKIETDNVKMEREELREENNKLKIETDNVKMEREELREENNKLKIETDNVKMEREELREENKKLKKDKGKLKRPSNPIQSPPLQEVNRKQTPSQKSEGIEGMKLESFPAPEMETLPEG"

     misc_feature    294..635
                     /gene="LOC109886139"
                     /note="Immunoglobulin domain; Region: Ig; cl11960"
                     /db_xref="CDD:472250"
     misc_feature    342..356
                     /gene="LOC109886139"
                     /note="Ig strand B [structural motif]; Region: Ig strand
                     B"
                     /db_xref="CDD:409353"
     misc_feature    390..410
                     /gene="LOC109886139"
                     /note="Ig strand C [structural motif]; Region: Ig strand
                     C"
                     /db_xref="CDD:409353"
     misc_feature    528..542
                     /gene="LOC109886139"
                     /note="Ig strand E [structural motif]; Region: Ig strand
                     E"
                     /db_xref="CDD:409353"
     misc_feature    570..587
                     /gene="LOC109886139"
                     /note="Ig strand F [structural motif]; Region: Ig strand
                     F"
                     /db_xref="CDD:409353"
     misc_feature    612..623
                     /gene="LOC109886139"
                     /note="Ig strand G [structural motif]; Region: Ig strand
                     G"
                     /db_xref="CDD:409353"
     misc_feature    669..914
                     /gene="LOC109886139"
                     /note="Immunoglobulin domain; Region: Ig; cl11960"
                     /db_xref="CDD:472250"
     misc_feature    687..701
                     /gene="LOC109886139"
                     /note="Ig strand B [structural motif]; Region: Ig strand
                     B"
                     /db_xref="CDD:409353"
     misc_feature    729..740
                     /gene="LOC109886139"
                     /note="Ig strand C [structural motif]; Region: Ig strand
                     C"
                     /db_xref="CDD:409353"
     misc_feature    822..836
                     /gene="LOC109886139"
                     /note="Ig strand E [structural motif]; Region: Ig strand
                     E"
                     /db_xref="CDD:409353"
     misc_feature    855..872
                     /gene="LOC109886139"
                     /note="Ig strand F [structural motif]; Region: Ig strand
                     F"
                     /db_xref="CDD:409353"
     misc_feature    <1014..1796
                     /gene="LOC109886139"
                     /note="MAEBL; Provisional; Region: PTZ00121"
                     /db_xref="CDD:173412"
ORIGIN      

gaagtactgtaagtgaaagtgaaagtaaagtgtgaaactccaccacccttttcctccgttatttctggaacagacgtcgtgttacattctgtgcgttgccaaattagcctttcaactgttttggtttatgtttctaaactcctaataattttattcaccagttacaaacagctttaccttggagtcagacttgttttgttagtgaaatgaagacctttccgacctcggcggtctggtgttttgggattctgttcatcagtgcttcattgataacgacagggtcgtctgaggttcaggttgttggaccggctgaccgagttgatgccttagctggtgatgacatcattctaccatgttccctgaaacccaatattagtgctaaggacatgctagtgcagtggacaggattgtacctgaaaacaagaaacgtccatctttatcgtcaaggtcgagactccaatgaggatcagtttccatcctacaggggaaggacatcaatgtttcatgaagaactgaagaacggcaacgtctccttaaagctgaccagagttactctctctgatgctggaagctacaggtgcttccttccaacactgaccagccaggtgaaggaaaccactgttcaactctttgttggtgctgtatctcagccagtgatctctattgttggaactaaagactggggggtggtcctgaagtgtgagtctggaggctggtttcctgaacctgagatggagtggctggacagttctggaaccatcctccctgctgatggacctccagagagacacagggactcagaggacctctacgctctgagacgacatgtcactgtggaccagactgacaccaacaggttcacctgtagagttcaccagacggagatcaatcacctgaaggagacagagattcatgtcccagatgacgtgtttcctaaatcacacgtagggttgattattggtctgtcaatactattagctgttgtagttctcgcagcttcagctggtgtctacaagtggagaaaacatacagacaaggtcacaagagagagggatggactcaaaggagagctgatggagctcagagaagagaacaacaagctcaaaatagagactgacaacgtcaaaatggagagggagaagttcagaaaagacaacgacaagctcaaaatagagactgacaacgtcaaaatggagagggagaagttcagaaaagacaacgacaagctcaaaatagagactgacaacgtcaaaatggagagggagaagttcagaaaagacaacgacaagctcaaaatagagactgacaacgtcaaaatggagagggagaagttcagaaaagacaacgacaagctcaaaatagagactgacaacgtcaaaatggagagggagaagttcagaaaagacaacgacaacgtcaaaatggagagggagaagttcagaaaagacaacgacaagctcaaaatagagactgacaacgtcaaaatggagagggaggagctcagagaagagaacaacaagctcaaaatagagactgacaacgtcaaaatggagagggaggagctcagagaagagaacaacaagctcaaaatagagactgacaacgtcaaaatggagagggaggagctcagagaagagaacaacaagctcaaaatagagactgacaacgtcaaaatggagagggaggagctcagagaagagaacaagaagctgaaaaaagacaaaggaaagctgaagagaccatccaatccaatccaatctccacctctccaggaggtcaacaggaaacagactccttcccaaaagtctgaggggattgaagggatgaagctggagtcttttcctgctcctgagatggagactttacctgaaggatgatctggagaagttgtgggtggaagttgagtttctatagagctgagttactatagagagactataactatagagctgagttactatagagagactataactatagagagactataactatagagagactataactat

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