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Previous release (v1)
2026-07-04 08:37:29, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_030796211 2337 bp mRNA linear PRI 17-SEP-2019
DEFINITION PREDICTED: Nomascus leucogenys retina and anterior neural fold
homeobox 2 (RAX2), transcript variant X1, mRNA.
ACCESSION XM_030796211
VERSION XM_030796211.1
DBLINK BioProject: PRJNA564096
KEYWORDS RefSeq.
SOURCE Nomascus leucogenys (northern white-cheeked gibbon)
ORGANISM Nomascus leucogenys
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hylobatidae; Nomascus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_044397.1) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Nomascus leucogenys Annotation
Release 103
Annotation Version :: 103
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.2
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2337
/organism="Nomascus leucogenys"
/mol_type="mRNA"
/isolate="Asia"
/bio_material="CORIELL:NLL605"
/db_xref="taxon:61853"
/chromosome="17"
/sex="female"
/tissue_type="EB transformed lymphoblast cell line"
/dev_stage="adult"
gene 1..2337
/gene="RAX2"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 mRNA, 20 ESTs, 7 Proteins, and
86% coverage of the annotated genomic feature by RNAseq
alignments, including 4 samples with support for all
annotated introns"
/db_xref="GeneID:100588120"
CDS 131..823
/gene="RAX2"
/codon_start=1
/product="retina and anterior neural fold homeobox protein
2 isoform X1"
/protein_id="XP_030652071.1"
/db_xref="GeneID:100588120"
/translation="
MPAPVEGTDFPGAGRQAWGSPALSLLVAPPAVSPPSVPLPSRQVGAMFLSPGEGPAAEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAMAAPRLPEAPALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFGPTFADGFALEEASLRLLAKEHAQALDRAWPPA"
misc_feature 350..520
/gene="RAX2"
/note="Region: Homeodomain; pfam00046"
/db_xref="CDD:459649"
ORIGIN
gccgtgacagccacagagaggggaagagaaaacagggaaggtgacacacacagagagaaggaagagcagacagaggcacagcaggagacccccccaagcccgaggaggacagcccggggatgcagagcacatgccggccccagtggagggaacagatttccccggagccgggaggcaagcctggggctcccctgccctgtccctgctggtagccccgccggccgtctccccgccatctgtcccgctgccatcccgccaggtgggagccatgttcctgagcccgggcgaggggccggcagccgagggtgggggtctggggcccggcgaggaggcccccaagaagaagcaccggaggaaccgcaccaccttcaccacctaccagctgcaccagctggagcgggcgttcgaggcctctcactacccggatgtgtacagccgtgaggagctggcggccaaggtgcacctacccgaggtgcgcgtgcaggtgtggttccagaaccgccgggccaagtggcgccgccaggagcggctggagtcaggctcgggtgccatggcagctccgagactacccgaggccccagcactgccgttcgctcgccccccggccatgtcgctgcccctggagccctggttgggccccggaccgccggccgtcccaggcctcccccgcctcctgggcccgggcccagggctgcaagcgtccttcgggcctcatgcctttggtcccaccttcgcagatggcttcgccctggaagaggcgtccctgcggctgctggccaaggaacacgcacaggctctggacagggcctggccgccggcctgagcctgctgccctcccgggccccctcctccgcccgacccgagaaccggggatgtgccctggtgacagccaccacgccttggcctaggtgaaggtcatggagcaaccgtggtcaggccaggccaccaccactggggagcaggaccagagagacaggctgctgggtcccctgcccccatcccatcccccaccccatcgccacccgtcctgctggcagcagaccggcccccagtgtcaggcaggaggtgacccaagcatttctcaggctaggggcggggccctcctcccctcctggggcttcagtctcccgtctatgaattgagcatgggggactctgaggttcacaggctgcgaggctgtgggtgcctgcagggccgctgactctgtaagatgagtgtaaatctctctgctgatcctaatccccatcagcagagctgcccactctgcaggctcccagtcccctggaaataacaaatagcggcagctcccgcaagcctggtctcctctcaccatgtgcccgccatgtgagcgctcccctctccattacgccctggacctcgggcacggctgtcagcccattctacagagagggaaaccggggctcaggcaggaagccaggtccccaagttcgcacggccaggagtggatggagctgcttttcagacccatcaccagtcctaccgtccggggcacagtgacaggttctggagggagggtgggtcccgggccaggtgctggtggggccctcgtgtggaggtgggctgatgctgggcgtgtcatcatcgtcagcccgttcctcacttccccacagaccccaggccctgtgcctgtcccctgcggacgcacggccagcatctgctctgtccaacccagtcgcattgcccaagagctctgagcaaggaggctgtcacgggaccgaggacccgctgggactggcaagcacggctggcccagtgcagcaggagggaccctgagccatgggatgggacagcctgggccagcgccaccccccggggacagaagtgcggggccagggcaggagctgcagtagctaccctccccatctccagcccgggctccccagatcactcccagatcaccagggcaccccatctctaggcagcacctcacacaccagtcctgtggcccaacacccagccatcacccaatgtcaccgtgcaccaggcactggggatgccgcagtaagcacaagaaagattttttttcaaaagctaaaccaggccaggtgcggtggctcatgcctgtaatcccagtgctttgggaggctgaggtgggaggattgcttgagaccagcctgggtgacatagcaagtccccgtctccacaaacatttttaaaatgtgccgggtgtagtggtgcacacctgtcatcccagctacccaagaagctgagacaagaggatcgcttgagcccaggtcgctgtgaccacaccgctgcactccagcctgtgcaacagagccagacctgactcaaaacaaataaaaaacaaatctaaaa
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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