LOCUS       XM_029716380            6685 bp    mRNA    linear   VRT 10-JUL-2025
DEFINITION  PREDICTED: Salmo trutta potassium sodium-activated channel
            subfamily T member 1b (kcnt1b), transcript variant X5, mRNA.
ACCESSION   XM_029716380
VERSION     XM_029716380.1
DBLINK      BioProject: PRJNA550988
KEYWORDS    RefSeq.
SOURCE      Salmo trutta (river trout)
  ORGANISM  Salmo trutta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Salmo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_042983.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_901001165.1-RS_2025_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.4
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/09/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6685
                     /organism="Salmo trutta"
                     /mol_type="mRNA"
                     /db_xref="taxon:8032"
                     /chromosome="27"
     gene            1..6685
                     /gene="kcnt1b"
                     /note="potassium sodium-activated channel subfamily T
                     member 1b; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:115164158"
     CDS             257..4006
                     /gene="kcnt1b"
                     /codon_start=1
                     /product="potassium channel subfamily T member 1 isoform
                     X5"
                     /protein_id="XP_029572240.1"
                     /db_xref="GeneID:115164158"
                     /translation="

MAGAKLTPSPSEIDPDVKTEATKTPEEPTWVNPLKPIRTMGSFGSDAGQRYQEEYSMDSTNAQVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCALYVIRVALDDPEQVTGVCVNCQNRTSTATAESTEITEINWELIFWVNRRVPVWAIQVTVALISFLEAMLLTYLSYKGNIWEQMFQISFILEMINTVPFIITIFWPPLRNIFIPVFLNCWLAKCALENMINDLHRAIQRTHSAMFNQVLILICTLLCLVFTGACGIQHLERAGKNLTLFNSLYFCIVTFSTVGYGDVTPHIWPSQLLVVILICVALVVLPLQFEELAYLWMERQKSGGNYSRHRAQTEKHAVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRILQIPLWSQRVIYLQGSALKDTDLMRAKMDDAEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEEFKYAMLALNCVCPATSTLVTLLVHTSRGQEGQLSPEQWQRTYGRCSGNEVYHIRLCDSKFFGEYDGKSFTYASFHAHKKYGVCLIGVKREDNKSILLNPGPRHIMSAPDTCYYINITKEENSAFIFKQEEKDKKGMPVTGLYDAPSRLPVHSIIASMVDQATFYGTVAMDLQNPADPPEDCSKLTLPTENGAGSRRPSIAPVLEIADSSSILPCDLLSDQSEDETNHSDEEGSSVSDFVKGYPPNSPYIGSSPTLCHLLPQKASFCCLRLDKGCRHNSFEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRKELNPIVLLLDYPPDNHFLEAICCFPMVYFMAGTIDNLDNLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSIITELTHPSNMRFMQFRAKDCYSLALSKLEKIERDKGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPIARLLLGLDTTPGSGYLCAMKVTEEDLWIRTYGRLFQKLCSSSAEIPIGIYRTESHMFSSSESQVSINVENTGGDDQRNNRRESWKEKTAQRNSTTSDQSEHPLLRKKSLQWARRLSRKNTKPPSRTERISQQRLNLYRRSERQELSELVKNRMKHLGLPTVGYEDVANLTASDVMNRVNLGYLQELQGISEHPLREETRTGANTDEMNDHQNTLSYVLINPPPDTMLELNDIVYIIRSDPLAGPDVPEDAAQGQSGGGGSRTRQDFGTETRDETHL"

     misc_feature    1058..1252
                     /gene="kcnt1b"
                     /note="Ion channel; Region: Ion_trans_2; pfam07885"
                     /db_xref="CDD:462301"
     misc_feature    1712..1996
                     /gene="kcnt1b"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; Region: BK_channel_a; pfam03493"
                     /db_xref="CDD:460947"
ORIGIN      

ttgaggctgagatgcaatggacctcacatctccgaaggatggagtgctgctcaataacaataagctcccagcactttctcacatgattgtgtgatgcagaaaggaatggaaaacaagtctacctcggtctatattgccgcagaagtgcgttcaggatgcagttttgaatttcagtcgctccataggctggtattgacaactgaggggtaacatattggtcattctcggcagggggtaacttgggagagggtggacgatggcaggcgctaaactcacgccgtctccttcggagatagacccagacgtgaagaccgaggcgacgaaaacaccggaggagccgacttgggtcaacccgttgaagccgatacggacgatgggctcttttgggagtgatgctgggcaaaggtatcaggaggagtacagtatggactctaccaacgcccaggtgcaggtggagttctatgtgaatgaaaacaccttcaaggagaggctcaagctgttcttcatcaaaaaccaaaggtcaagcctgagaatccgtctgtttaacttctccttgaagctgttgacgtgtgccctttacgtcatcagggtggctctggacgaccctgaacaggtcactggagtatgtgtcaactgtcagaatagaacaagcacagccacagcagaatccacagaaatcacagaaatcaactgggagttgattttctgggtgaacagaagggttcctgtctgggcgatacaggtgaccgtggccttaatcagtttcctggaggcgatgctcctcacatatctcagctacaaggggaatatctgggagcagatgttccagatctccttcatcctggagatgattaataccgtgccatttataattactatcttctggccgccgttgagaaacatcttcatcccagtgtttctcaactgctggttagccaagtgtgccctggagaatatgattaacgatctccatcgtgccatccagaggacccactctgccatgttcaaccaggtcctcatacttatctgcacccttctctgtctggtcttcactggggcgtgtggtatccagcatctagagagggccggaaagaacctgactctgttcaactctctgtatttctgcatcgtcaccttctctacggtgggctatggtgacgtcacacctcatatctggccttctcagctgctggtggtcattctcatctgtgtggccctcgtggtgctcccgctacagtttgaggagttggcctatctgtggatggagcgtcagaagtcaggagggaactacagcagacaccgggcccagacagagaaacatgctgtcctgtgtgtcagctctctgaagatagacttgctcatggacttcctcaacgagttctacgctcatcctagattacaggactactatgtcgtgatcctgtgtcctacagagatggacatccaggtgcgtcgtatcctccagatccccctgtggtcccagagggtcatctatctccagggctcagcactcaaagacacagacctcatgagggccaagatggatgatgcagaagcctgttttatcctgagcagtaggaacgaggtggaccgcactgctgctgaccaccagaccatcctcagagcatgggctgtgaaggactttgccccaaactgccccctgtatgtccagatcctcaaaccagagaacaaattccatgtaaagtttgctgatcatgtggtctgtgaggaggaattcaagtatgccatgctggctctgaactgtgtatgtccagccacatccacactggtcacactcctggtgcacacctccagaggacaggagggccagctgtcaccagagcagtggcagaggacgtatggacgttgctctgggaacgaggtctaccacatccgtctgtgcgacagcaagttcttcggggagtacgacgggaagagtttcacctacgcctccttccacgcacacaaaaaatatggtgtgtgtctgatcggggtgaagagggaagacaacaagagcatcctgctgaacccaggtcctcgccacatcatgtccgccccagacacctgctactacatcaacatcaccaaggaagagaattccgcgttcatattcaaacaggaggagaaagacaagaagggcatgccggtgaccgggctgtatgacgccccctccaggctgcctgtacacagcatcatcgccagcatggttgatcaggccactttttatgggacggtagccatggacctccagaacccggcggaccccccagaggactgcagcaagctgaccctgcctacagagaacggggctgggagcagacggcccagcatagcccccgtcctggagatagctgactcctcctccattttgccctgcgacctgctcagtgaccaatcagaggacgagaccaaccactcagacgaggagggctcgtcggtgtcagactttgtgaaaggataccctcccaactccccatacattggcagctctccaaccctgtgccatctcctacctcagaaagcctcattctgctgccttcggctggacaagggttgcagacacaacagttttgaggatgccaaggcctatggttttaagaacaagctgatcatagtatccgcggagacggcagggaacggcctttataactttatcgtccctctacgtgcttactaccgccccagaaaagagctcaaccctattgtactgctactagactacccgcctgacaaccacttcctagaagccatctgctgtttcccaatggtctacttcatggccggaaccatagataacctggacaatctgctacagtgtggcatcatctatgccgataacctggtggtggtggacaaggagagcaccatgagtgctgaggaggactatatggcagatgccaagactatcgtcaacgtacagaccatgttcaggctgttccccagtctcagtatcatcaccgagctgacccacccctccaacatgaggtttatgcagttcagggctaaggattgctactccctggctctctccaagctagagaagatagagcgtgataagggttccaacctggccttcatgttccgcctgccgttcgctgcaggcagagtgttcagtatcagtatgctggatacgctgctctaccagtcatttgtaaaggactatatgattcccatagcaagacttttactaggcctggataccacaccagggtctggttacctatgtgcaatgaaggtgacagaggaggacctgtggatcaggacgtatggcaggttattccaaaagctgtgttcttccagtgcagagattccaataggcatctaccgtacagagtcacacatgttctcctcctcagagtctcaagtatccatcaacgtagagaacactggtggtgacgaccagagaaacaatcgtcgcgagtcgtggaaggagaaaacagctcagcggaactccaccaccagcgaccaatcagaacatccgttgctgaggaagaagagcctccagtgggcacggcgtctgagccgtaagaacaccaagccaccgagtcgcaccgagcggatctcccagcagcgcctcaacttgtaccggcgctccgagagacaggagctgtctgagctggtcaagaaccgcatgaagcacctaggcttacccactgtcggatacgaagatgttgctaatcttactgcgagtgatgtcatgaaccgagtaaatctaggatatttacaagagttgcagggaatttcagagcatccgttaagagaagagaccagaacaggggcaaacacagatgagatgaacgatcaccagaacactctgtcctacgttctcatcaacccccctccagacaccatgctggagctcaatgacattgtctacattatccggtccgacccgctggcggggcccgacgtgcccgaggatgcggctcaggggcagagcggcggtggcggcagccggacgaggcaggactttggcacagagaccagggatgagacccacctctgaaatcccctcgcccccccctggcaccctcgcctcaccacccccggacctctcgcccccttgtctcaccacctttgcacgatacattctatttgtgccatacaaggggaagatccccactgcccttgcccacccttaccttccaatccccctccaccctgtgtcagacttacagagagacatgtgtcctgagctgctatgggaggatgcatgaagagtgcctcgtcattacctaacctaacctaaccccttagagagcatcagacacaaagactcagacatggccctctttgcaaaagatagaccatgaacaatgcaccagtcgatggaaacatactggtaaccaaccaaaggagaggagagacagattatgtcggaggtcatgtgatgctctgaatatttagaggtttgtttgatttagctcatcggcatactaggtgggtggagcttgcttgcactttagcaccaatagaaaggtgtcaaaagggcaaactctgcccaaatggcgcgcctgcgagctacaccaagcacacttggcatgtgtgtgtgtgtagactgtgaatatcagttgcaaaatcaagtcatgtacagaaattgttattccttaacaagaattcctggcagtattcatacacatcaatcatgaaagtacatgagaacttattattttccctatgagcacaacccactgggcccagacatcaattcaacatctattccacgttggttcaacgtaatttcactggaattatgtgaaaacagcatgtggccagtgggaagacttttataagcaatttttttaaacactatcttttactgctcattctgtatctttttttttttctcgcgaatatcatgctatttgttattaaaaagtacagaatacttaatggattgatgaaccttaataaattacgccatgcacctacgtcattctatttgtgccatacagtttctggttcttctttatgtatcagtcaatgttctacgaaagccaatgctcaatcattccacatttctgacaggactttgttctactgtaattaataatctttcacagctgtttacagtggcaaccctacgttatgaacacttgttataagtacttattttgcacaataagagacaggcatagttaaagtgatagttcactccaaaatgaacatgttttcagatatcaaaagtaatctgatgttaagatgagttggagtgaactattacttcaagtctgttaatatggccagtacctgggcttggagtgcagtgttgcaagctgccttccaatatggcatttcacttgtacagtaaatgtagtattgtgtgtgctttatatattttaataattatttatctgttgtaatttctggtagtgtttgcttggactaatatgtgtggttatatcattgtaaacattttttatccgcattgtttggttcagtgttcttttggtcattattagtaaaatgaaaacaaatgggacttgaaatatttttgcactaagctctgtggttgttaatagagcattatagcatgaccctttaacccgaaactttaactgtacaataaaatactttagtattcgcacagtctccatacagtcagaagtgttatatatatatatagtatatcaactttaagggctgtattcaatccgatccgctttagacgacatctgcgtagcggttgtttttcggtgtcagaggtggaactgttagagctgtcaaatccacaagcagcttctggcattatacctaaagaggacattgccattggctgttcccaatttagcggagacggcattcacggtaaacactgcatatggcggctcaatcggaaattacctttacatttctatcgcggaatctgtaaagattgaatagagccctaggcctttgttaagtacatttgcaaagttttaaatgatcattgtcattgtaaacaacagaatatattttgatatgtgccatttctgctcgtttgttataaaatgtaatagggaagtagttctgaacatgcattgcctgattgcatgaatgagattaagttgatggaaaggttagataggaaaaaagtgggtcaagtcaggcttttacattattttgcagtttgaagatctctggagtagtccttgatgtgttttgggatgtaatgcaatgtgtccccactcccattgaagtactgtatgtatgtgtagataaaatatgttccatactagccaggcccccagaagggcagtttacagatcatcacctcttgtgtcctcccccctcatcattgttgtatgtaaacagaaccccaagggaattctctttattggagaagttcagtaaaaaaattagtttttgaagttcatactgtattatagaaaggggcatgcaaacacaaaaaagcatgttttgagagaaagcttgccaaaccagatatgttttcctacatttaggtgaactgtgtgaagtatcacatctcccgcttgttatttgtcagcatatcatttgatatctttatatgggaccatgcatgtcctccagacaaaatcttctgtttacctttatcatatttttagttaattgtcaaaaaggtttgatccattttgtactttttcttattccgaagtatgtgtacttctctaccatgatgtaaactatgaacaataaatgctgcatgcagccggaaacattgaaa

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