LOCUS       XM_027768790            1745 bp    mRNA    linear   MAM 23-JAN-2019
DEFINITION  PREDICTED: Tupaia chinensis testis and ovary specific PAZ domain
            containing 1 (TOPAZ1), transcript variant X4, mRNA.
ACCESSION   XM_027768790
VERSION     XM_027768790.1
DBLINK      BioProject: PRJNA221634
KEYWORDS    RefSeq.
SOURCE      Tupaia chinensis (Chinese tree shrew)
  ORGANISM  Tupaia chinensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae;
            Tupaia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_006207351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Tupaia chinensis Annotation Release
                                           102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Tupaia chinensis"
                     /mol_type="mRNA"
                     /db_xref="taxon:246437"
                     /chromosome="Unknown"
                     /sex="male"
                     /geo_loc_name="China"
     gene            1..1745
                     /gene="TOPAZ1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:102471870"
     CDS             61..1698
                     /gene="TOPAZ1"
                     /codon_start=1
                     /product="protein TOPAZ1 isoform X4"
                     /protein_id="XP_027624591.1"
                     /db_xref="GeneID:102471870"
                     /translation="

MFLEYYRKFPPGVHFDAQVLNDLLSALLRHCLLKEVLQVVSLGLTVNMLPALKILLKVFEHVATMKLRNAVPALIDVFCKLVEAGMLLDPEHCNYIIKLLHQVQASKEEVSAVLEVKSRLQMRQFTKNWKWDLDAALTEIEHCKEKGDWTKLGNLYINIKMGCENFVDFQRLCACIAEALTKDSQEERPCVPFCEFAETVSKDPHNSEVDRTLLGRIGISALYSCHRLSQWPKGRKVLDKLYELKIHFTSLKGLIGPERLAPRCQIVNVAAEIFLKSGSLDGAIWVLRESQWTISTPLWPCGRLDVLSRRALLCTIAHEILGKSLYRQTFEVLQNLPGFQNSQEKVEVSQYSLLFNKLLDACIESNSLGMSSSVAEFMISNNVPIDFSFLRRLITSLGRSCLWLKARAHYKSALSLGCYPPSEGRIYRKLLLIPSYLSEIEMLLAVEVFLVANASSIQSPGASTQALQIVLKRCEENKSRSKDDYQAAVRRLITAARISDPKLFIKHVTVNVDKEQVCSLEPCSALKWLRENLKWAAKVWRFSDR"

     misc_feature    478..1005
                     /gene="TOPAZ1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

ctgtgagcgatcaccgtgcaagtttgcgcatgtgcctgagcagggcgatgagaagtgagcatgttcctggagtactacaggaagttccctccgggcgtgcacttcgatgcccaagtgctcaatgaccttctgagtgccttgctcagacactgcttgttgaaagaagtgcttcaggtggtgagcctcggcctcacggttaacatgctgcctgctctgaaaatattgctgaaagtattcgagcacgtggcaactatgaaattaaggaatgcggtacctgctctaatcgatgtcttctgtaagcttgtcgaggctgggatgctgcttgacccagaacactgtaattacatcattaagctcctgcaccaagtacaggcttccaaagaagaagtaagtgcagtgctggaagtgaagtccaggttacagatgaggcaattcaccaagaactggaagtgggacttagatgcggccttgactgagatagagcattgtaaagaaaaaggtgactggaccaaattgggaaatttatacattaacataaaaatgggctgtgaaaattttgtagatttccagagactttgtgcttgtattgctgaagcactaacaaaagactctcaagaagaaagaccgtgcgtccctttctgtgaatttgctgaaacagttagcaaagacccacacaatagcgaagtagacagaaccctgctgggaaggatcggaatcagtgccctgtactcctgtcacaggctgtcccagtggcccaagggaaggaaggtcttagataaactatatgagttaaaaatacacttcacaagtttaaaagggctaatagggcccgagagattagcaccgaggtgtcaaattgtgaacgttgctgctgagatctttctgaaaagcggaagcctggacggtgccatttgggtgttgagggagtcacagtggaccatcagcacgcccctgtggccatgtggcagactggatgtgctcagccggcgtgctctgctctgtacgattgcacacgagatcttgggcaagagcctgtacagacagacatttgaagttctgcagaacctgccgggctttcagaactcccaagaaaaagtggaagtctcacagtatagccttcttttcaataagcttctagatgcctgtatagaaagcaacagtcttggtatgtcatcttctgtggcagaattcatgatttcaaacaacgtccctattgatttttcctttctcagaagattaattacttctttaggaaggagctgtttatggctcaaagccagagcccactacaaaagtgctctctccctggggtgctacccgccatcggagggacgcatctaccgcaaactcctgctgatcccttcttacttatctgagatcgaaatgcttttagctgtggaggtcttcctggtagccaacgcgagcagtatccagagtccgggcgcgtccacacaggcactgcagatcgttttgaaaagatgtgaagaaaacaaatctcggagcaaagacgactaccaggccgcggtaagaaggctgatcactgccgcccgtatttcagacccgaagctcttcatcaagcacgtgacggtcaacgtggacaaggagcaggtgtgcagcctggagccctgctccgccctcaagtggctcagggagaacctgaagtgggccgccaaggtctggcgcttcagcgaccgctagtcccataggctgtttgtttgtttaagtttaatcattgttgaaatgaa

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